Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02210 ATGGAGGGTAGGAGTATTGagaggaagagaacattgatgatggagaaggtgagaaggaacaacacagtggaagaagaagtggaaaatgaagtagaagatgaggaTTGTATTGGTGATGCTAGTGTAACTGAAGAAGAGAAGAAGAAAGGGGTTGGTCTTGggagaagaggaggaggatcaggtggtggtggaggTGTTTCTCCACCTTCCTGCCAAGCTGAAAGGTGTGGAGCTGATTTGACCGATGCAAAGCGATATCATCGCCGCCATAAAGTGTGTGAGTTTCATTCCAAGGCACCTGTCGTGGTGGTTGCAGGACTGAGGCAGAGGTTTTGTCAACAATGTAGCAGGTTCCATGACTTGGTAGAGTTTGATGAATCTAAAAGAAGCTGCCGCAGGCGGTTGGCTGGACACAATGAACGGCGCCGGAAAACCAATCCAGAAGCTGCCAATGAAGGATGCAGCCACAGCAAAGGGCAAAATCAACCTAAGGAAGCACAGTGCAGGATTCAGATGAACTTACCAGCAGGGAGTTCTGGATATAAGTCTTTTAATATTAGGTGA 564 0.3723 MEGRSIERKRTLMMEKVRRNNTVEEEVENEVEDEDCIGDASVTEEEKKKGVGLGRRGGGSGGGGGVSPPSCQAERCGADLTDAKRYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFHDLVEFDESKRSCRRRLAGHNERRRKTNPEAANEGCSHSKGQNQPKEAQCRIQMNLPAGSSGYKSFNIR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02210 187 Gene3D - 62 132 IPR036893 GO:0003677|GO:0005634
Car07g02210 187 Pfam SBP domain 71 144 IPR004333 GO:0003677
Car07g02210 187 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 37 164 - -
Car07g02210 187 MobiDBLite consensus disorder prediction 44 72 - -
Car07g02210 187 MobiDBLite consensus disorder prediction 150 166 - -
Car07g02210 187 SUPERFAMILY SBT domain 69 149 IPR036893 GO:0003677|GO:0005634
Car07g02210 187 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 37 164 IPR044817 GO:0003677
Car07g02210 187 MobiDBLite consensus disorder prediction 136 166 - -
Car07g02210 187 ProSiteProfiles Zinc finger SBP-type profile. 68 145 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02210 Car-Chr7 31701584 31702940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02210 1 187 SBP-box Gene Family AT3G15270 46.032 1.67e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Car07g02210 SBP 2.9e-31 No_clan