Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02199 ATGATTGAGATGCGATGGCGATGGTCGCACAGAGAAGAGTTCGTAGACACTATGAGATATGGGTTACAGGTTACAGGTTTCACATGGAAGGGTTGCGTCAGGAGAAAAGGGTTCTCAAGGAGAGGAGGGTTTCATAGGGAGATGATGATTTGCAAGGAGAGTGAACAATGTAGTGAAAAAACCAACGCAATGAACAACGCATTGAAGAAACCAATTGTAGTGAGGAGGATTTGCAATGAACAACGCGGGCTCCTCCGCATCCCAAAGCCCGTCTCGTTCCTCCGCATCCCAAAGCCTTCTCGTTCGAGCTGCTTCGCTTCGCTCCTTCTTCTTGTCCGAACCCTCCGCATCCCTGCTTCACTCCGCCGTGATGATCGCTATCTCTTAAGGCTCCGCATCCCAAAGCCTTCTCGTTCGAGCTGCTTCGCTTCGCTCCTTCTTCTTGTCCGAACCCTCCGCATCCCTGCTTCACTCCGCCGTGATGATCGCTATCTCTTAAGCCAAGTTCTTGGAGAATCTATAGTTTCTGGTGTTGGGCGAGATGGGGATAAAACTCAACTCCTTGCTTCAGCCCTTCTTCTCCCACAGACAGACCTGGGTGGGGATCTCTACTCGAATAGAAGGCGCGAACTCATCGATGCTATGACAGCCCTTCCTTGCCTAACCGCTGCTGTTTTCTCAGGTCGAGTTGAGGGCTTGAGCTTCTATGATTCCTGTCAAGTTTTCACTGACGTAGTTGGCAGCCCATACTATGTTGCTCCCGAGGTTCTCCTCAAGCATTATGGGCCTGAAGCAGATGTTTGGACCGCCGGTGTCATACTTTATATATTGCTCAGTGGTGTACCACCGTTTTGGGCAGATCCATGGCCTCTAATATCTGATAGTGGAAAAGATCTGATTAGAAAGATGTTGTGTTCTCAGCCTTCAGATCGGTTGACTGCTCATCAAGTCTTATGTCATCCTTGGATATGTGAAAATGGAGTTGCCCCTGACAGATCATTGGACCCTGCTGTTCTTTCTCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCATTGCGGGTAATTGCCGAAAGTCTATCTGAAGAGGAAATTGCTGGTTTGAGAGAAATGTTCCAGACTATGGATACTGATAACAGTGGTGCAATCACTTTTGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATACAGAAATACGCGATCTTATGGAAGCGGTAGGGTGTTAG 1251 0.478 MIEMRWRWSHREEFVDTMRYGLQVTGFTWKGCVRRKGFSRRGGFHREMMICKESEQCSEKTNAMNNALKKPIVVRRICNEQRGLLRIPKPVSFLRIPKPSRSSCFASLLLLVRTLRIPASLRRDDRYLLRLRIPKPSRSSCFASLLLLVRTLRIPASLRRDDRYLLSQVLGESIVSGVGRDGDKTQLLASALLLPQTDLGGDLYSNRRRELIDAMTALPCLTAAVFSGRVEGLSFYDSCQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWADPWPLISDSGKDLIRKMLCSQPSDRLTAHQVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQTMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAVGC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02199 416 SMART serkin_6 164 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02199 416 CDD EFh 371 414 IPR002048 GO:0005509
Car07g02199 416 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
Car07g02199 416 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Car07g02199 416 Gene3D - 331 415 - -
Car07g02199 416 SUPERFAMILY EF-hand 351 413 IPR011992 -
Car07g02199 416 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 234 286 - -
Car07g02199 416 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 286 414 - -
Car07g02199 416 Gene3D Transferase(Phosphotransferase) domain 1 226 327 - -
Car07g02199 416 ProSiteProfiles Protein kinase domain profile. 14 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02199 416 Pfam Protein kinase domain 237 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02199 416 PANTHER SERINE/THREONINE-PROTEIN KINASE 234 286 - -
Car07g02199 416 SUPERFAMILY Protein kinase-like (PK-like) 238 348 IPR011009 -
Car07g02199 416 Pfam EF hand 371 397 IPR002048 GO:0005509
Car07g02199 416 PANTHER SERINE/THREONINE-PROTEIN KINASE 286 414 - -
Car07g02199 416 SMART efh_1 370 398 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02199 Car-Chr7 31406480 31412418 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02199 232 413 EF-hand Containing Proteins AT4G38230 81.188 4.05e-111 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car07g02199 Pkinase 4.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02199 K13412 - cam:105852821 352.829