Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02184 ATGGGTGGTCATCAAGTAATCAATTCCCCTTTTTGGAGCTTTGTTTTAGTTGTTGTGATAGTAACATTCTTCACTACAATTGTTAGTTCTTCCAAACAATCTCAAATAGAAGGCATGAAAATGAATGTGATTGATCAATGTTGGAGATTTAATCCAGAATGGAGGAAACATCGTCAACAACTTGCCAGGTGCTCAGTTGGCTATGTAGGAAAAATGACAAACAACATAGGTAAAGACCTTGTTCATTATAAAGTTACTGATCCTAGTGATCACCCCTTAAACCCACAACCTGGAGCTTTGAGATATGGAGCTTCTAACATTCAAGGTAAAGTTTGGATCACATTCCAAAGTGACATGAACATTAGACTTGAGAAGCCCCTTCTTATTAGTAGTTTCACTACCATTGATGGTCGAGGTGTCAATGTCCACATCGCTAATAATGCATGCTTGATGATCTATAAGGCAACAAACATAATTATCCATGGAATTAGGATTCATCATTGTCGACCCCAAGCTCCCGGAATGGTGATGGGTCCCAATGGAAAGATAATGTCGTTGGGTCAAGTGGATGGAGATGCAATTAGATTGGGGTCTGCTTCAAATATTTGGATTGATCATAACACACTTTATGATAGCCAAGATGGTCTTCTTGATGTTACGCGATGTTCTACTGATGTGACAATCTCTAACAATTAG 696 0.3865 MGGHQVINSPFWSFVLVVVIVTFFTTIVSSSKQSQIEGMKMNVIDQCWRFNPEWRKHRQQLARCSVGYVGKMTNNIGKDLVHYKVTDPSDHPLNPQPGALRYGASNIQGKVWITFQSDMNIRLEKPLLISSFTTIDGRGVNVHIANNACLMIYKATNIIIHGIRIHHCRPQAPGMVMGPNGKIMSLGQVDGDAIRLGSASNIWIDHNTLYDSQDGLLDVTRCSTDVTISNN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02184 231 PANTHER PECTATE LYASE 15 231 - -
Car07g02184 231 PRINTS Pollen allergen Amb family signature 89 114 IPR018082 -
Car07g02184 231 PRINTS Pollen allergen Amb family signature 126 142 IPR018082 -
Car07g02184 231 PRINTS Pollen allergen Amb family signature 190 211 IPR018082 -
Car07g02184 231 PANTHER PECTATE LYASE 18-RELATED 15 231 IPR045032 GO:0030570
Car07g02184 231 SUPERFAMILY Pectin lyase-like 39 231 IPR011050 -
Car07g02184 231 Pfam Pectate lyase 128 231 IPR002022 -
Car07g02184 231 Gene3D - 41 231 IPR012334 -
Car07g02184 231 SMART amb_all 118 231 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02184 Car-Chr7 30359520 30360529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02184 72 231 Polysaccharide Lyase AT5G09280 65.000 2.12e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02184 K01728 - gmx:100811216 369.777