Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02183 ATGCTTCTTGGACACGATGATGGATTCGTAAGAGACAAGAACATGAAAGTAACTGTCGTATACAACTATTTTGGGCCTAATTGCCTCCAATGCATGCCTAGAATTCGTCACAGATATGCACATGTTGCAAACAATCTCTACATGGGATGGACGCAATATGCAATTGGTGGAAGCAGCGGACCAAGCCTTAAAAGTCAATCAAACCTCTTCATAGCACCAACAGAAAATAAGGAGGTGACATGGAGAAAAAGTAGTAATGGAATTGAAGATACGTGGAAATTTTATTCAGTTGGAGACGCCTTTGAAAATGGTGCATCCTTCATAGATACAAAAGGTGAACAAGTGAAAAAAACCCAATTATAG 363 0.3939 MLLGHDDGFVRDKNMKVTVVYNYFGPNCLQCMPRIRHRYAHVANNLYMGWTQYAIGGSSGPSLKSQSNLFIAPTENKEVTWRKSSNGIEDTWKFYSVGDAFENGASFIDTKGEQVKKTQL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02183 120 PANTHER PECTATE LYASE 1 117 - -
Car07g02183 120 PANTHER PECTATE LYASE 18-RELATED 1 117 IPR045032 GO:0030570
Car07g02183 120 Gene3D - 1 120 IPR012334 -
Car07g02183 120 SUPERFAMILY Pectin lyase-like 1 110 IPR011050 -
Car07g02183 120 PRINTS Pollen allergen Amb family signature 92 116 IPR018082 -
Car07g02183 120 PRINTS Pollen allergen Amb family signature 53 72 IPR018082 -
Car07g02183 120 PRINTS Pollen allergen Amb family signature 31 50 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02183 Car-Chr7 30358797 30359498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02183 1 79 Polysaccharide Lyase AT5G09280 71.250 2.02e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02183 K01728 - gmx:100811216 192.2