Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02163 ATGGGAGTTCCAGAGAAGGATCCTCTCTCACAGTTGAGTTTACCTCCTGGTTTCAGATTCTTCCCCACTGACGAGGAGCTTCTGGTTCAGTACCTCTGCCGCAAAGTTGCTGGACACCATTTTTCTCTCCCAATCATTGCCGAAATTGATTTATACAAATTCGATCCCTGGGTTCTTCCAGGCAAAGCGATATTTGGTGAGAAAGAATGGTACTTTTTCAGTCCTAGGGATAGAAAATATCCGAATGGTTCTCGACCCAACAGAGTTGCTGGATCGGGTTACTGGAAAGCCACAGGAACTGACAAAATCATCACAACTGAAGGTAGAAAAGTTGGAATAAAAAAAGCACTTGTTTTCTATATTGGCAAAGCACCAAAGGGTACAAAAACTAATTGGATTATGCACGAGTATCGTCTTCTTGACGCAACAAGAAAACATAACCTTGGCAGCTCCAAACTAGATGATTGGGTTCTGTGTCGCATATACAAGAAGAATTCAAGCTCGCAAAAGGAAGTTCTGACATTTTCGAGCAAAGAATACAGCAACGGGTCGTCGCCTTCATCGTCGTCCCACGTGGACGACATGGTGGACTCGTTCCCAGAAATCGACGACCGGAGCTTTGCACTACCGCGTGTGACATCGCTCCGAATGCTTCAACAGGAGGAGAAGCTCGGATTTCACAACATGGATGCCGGAATATTTGCGGATTGGGTTAATCCGACGGATCTGGAGTCAATACCCGAATTTGATTCAGACTATAACACGCAGGGGACATTCAATTTCAATTTTAATGACCATACTGTCCCTTCGGTGCCGCCGTTTGGTTACATGGAGTTAACGACGGCATGCAGGAAAGCCGCCGAGGAAGAGGTTCAAAGCGGGATGAGGACCCAGCGGGTTACCGAGACTTCCGGATTATATCAGCATAATTCAAATATATTTTTATCGGGTTTGGGTGACCCGTTTGGGTTTAACTATTCGGGTCACTAA 990 0.4566 MGVPEKDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPGKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDATRKHNLGSSKLDDWVLCRIYKKNSSSQKEVLTFSSKEYSNGSSPSSSSHVDDMVDSFPEIDDRSFALPRVTSLRMLQQEEKLGFHNMDAGIFADWVNPTDLESIPEFDSDYNTQGTFNFNFNDHTVPSVPPFGYMELTTACRKAAEEEVQSGMRTQRVTETSGLYQHNSNIFLSGLGDPFGFNYSGH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02163 329 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
Car07g02163 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 311 - -
Car07g02163 329 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Car07g02163 329 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Car07g02163 329 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Car07g02163 329 PANTHER NAC TRANSCRIPTION FACTOR 56 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02163 Car-Chr7 29673795 29675840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02163 1 328 NAC Transcription Factor Family AT4G27410 57.307 1.78e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car07g02163 NAM 2.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02163 - - gmx:100811301 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02163 07 29673795 29675840 Car07g02163 07 29673795 29675840 ECH