Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02152 ATGAACGAGAAGGCCAACGTTTCTAAGGAGCTCAACGCCAAGCACAAAAAGGTATTGGAAGGACTTCTTAAATTACCAGAGAATAGGGAGTGTGCTGACTGCAAAGCTAAAGGCCCAAGATGGGCTAGTGTCAATCTTGGCATCTTTATTTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTACACATTTCAAAGGTTCGCTCTGCTACTTTGGACACCTGGCTTCCAGATCAGGTTGCATTCATTCAATCTATGGGAAATGAGAAAGCAAATAGTTACTGGGAAGCAGAATTACCCCCAAATTATGACAGAGTTGGCATTGAAAATTTCATTCGTGCAAAGTATGAAGATAAGAGATGGGTTGCAAAGGACAGTAAGCCCAGATCACCTTCTAGACTGCTAGAAGAGAAAACTGCTTCACAATGGCAAAAGCCTGTGGAAAGAGCTGGGCATAATTATGTTGCTGAGAATACTTTTAACGAAAGGAAGAAATACCAACCATCAAATGCAATTCCTGCTATTAGAATTAGTGTTCCTGCTCCTCCTAAAGGACCTGAGCAGGTAACTCCAGTGACTAAACATCAGCATATTGAGAGAGTGGAACCTCTGGTGCCACAAGTGCAAGCTGAAACATCACAGACGACTAGCACAGTTCATAATTCCCCTCCAAAAGTTGACTTTGCTACGGATCTTTTTGACATGTTGTCTATGGATGCTCCAAACGAAAAGGGCTCAAACGCAGCTGATGCTAGTGCTGACGATGATAACAACTGGGCAGGTTTTCAGAGTGCTGGAGAGACATCGACGGCTGAGAAAACTGACACTGGGAAATCAGTTGAGAGTACACCCCAGCTCACCTCTGGAATTGAGGATCTATTTAAAGACTCATCTTCAGTGACGCCAAGTTCTGCTCTTGAAAAACCACAAAAGGATGTAAAAAATGATATTATGAGCCTCTTTGAAAAGACCAATATAGTGTCGCCATTTGCTATGCATCAACAGCAATTGGCTATGCTGGCCCAGCAACAGTCTCTTCTAATGGCTGCTGCTGTTAAATCTGCCAATGGGGATTCCAAATATCCTGCCAATGTACAGCAACCTGGTTCCAATGTTCCTGTTCAAAGTTGGCCAGCTGGAAGCTATCCAATTCCTGGAGTAATGCCCATAGGTGGTCAGGCTGATTTGCAGAAACTTATGCAGACAATGAACATGACTTCGGCGCATCCAGCAGGGAGCTCAGTTCAGTATCCACCGTCTAGTTATTTTACGATGGCGCAAGTTGCTCCAGTTAATGGCACGACAACATCGAGTAAACCTCAGTCAGCAACTCCGGTATCATCAACCACTACACAAACGGCGAATGATTATGATTTTTCCTCATTAACACAAGGAATGTTTGCGAAACCCTGA 1416 0.4393 MNEKANVSKELNAKHKKVLEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPDQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEDKRWVAKDSKPRSPSRLLEEKTASQWQKPVERAGHNYVAENTFNERKKYQPSNAIPAIRISVPAPPKGPEQVTPVTKHQHIERVEPLVPQVQAETSQTTSTVHNSPPKVDFATDLFDMLSMDAPNEKGSNAADASADDDNNWAGFQSAGETSTAEKTDTGKSVESTPQLTSGIEDLFKDSSSVTPSSALEKPQKDVKNDIMSLFEKTNIVSPFAMHQQQLAMLAQQQSLLMAAAVKSANGDSKYPANVQQPGSNVPVQSWPAGSYPIPGVMPIGGQADLQKLMQTMNMTSAHPAGSSVQYPPSSYFTMAQVAPVNGTTTSSKPQSATPVSSTTTQTANDYDFSSLTQGMFAKP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02152 471 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 470 IPR044520 GO:0005096
Car07g02152 471 CDD ArfGap 19 117 - -
Car07g02152 471 MobiDBLite consensus disorder prediction 252 309 - -
Car07g02152 471 MobiDBLite consensus disorder prediction 433 463 - -
Car07g02152 471 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Car07g02152 471 MobiDBLite consensus disorder prediction 433 471 - -
Car07g02152 471 MobiDBLite consensus disorder prediction 208 225 - -
Car07g02152 471 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Car07g02152 471 MobiDBLite consensus disorder prediction 240 311 - -
Car07g02152 471 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Car07g02152 471 PANTHER ARF GTPASE ACTIVATOR 1 470 - -
Car07g02152 471 MobiDBLite consensus disorder prediction 177 227 - -
Car07g02152 471 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Car07g02152 471 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Car07g02152 471 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Car07g02152 471 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Car07g02152 471 SMART arf_gap_3 16 130 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02152 Car-Chr7 28814592 28834200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02152 16 123 C2H2 Transcription Factor Family AT4G05330 48.276 1.92e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02152 K12486 - gmx:100807561 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02152 07 28814592 28834200 Car07g02152 07 28814592 28834200 ECH