Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02147 ATGGTGTCATCAGCTTCGCCATGTTCTCTTACGAGAAGCTCGTTGGAAGAGATGCTTGACTCGCTTCGCCGGAAGGACGAAGGTGAAGCGAATAAGAAGGATTCGCCACCGGCGTTGCCATCCCGGCCGGCGTCAAAGGCTCGGCTCCCTCGGGCAAAGCGGTCGCTGCCAAATAATTTCAAGGTCGGCAGCGGCGGTGGTGTGGTGAAGAATGGATTTAATGATAATGAAGAAAGTGTGGAAAGTAAGAGGAAGGAAACATGTTTGGAAAATAAGATAAGAGAGAGTAGTTTTGGGAGGAAGAGGGTGAAGAAGGATGTTGTCGAGTCACCTTACGTGGCACCAATTTGTGAATCAGGGATCGTTTCAGAATTGGATGGTGATACTATTTCTTATTTCATCAAAATGGTAACTCTCAACTTGGAAAAAGGGCAATGGGAGCTAGGGTCGATAAGATCAACTTCAGGAGAGGAAGCATCTGTTTCACTCTCAAATGGAAATGTGCTGAAAGTGGCTAGATCAGAGATTCTACCAGCTAATCCTGATATTTTAGAGGGTGCCGATGACCTTATTAAACTCGCTTATTTGAATGAGCCATCGGTTCTTTACAATCTTAGGTTTAGATATTCCCGGGATATGATTTATAGCAAAGCAGGGCCCATTTTAATTGCACTCAATCCTTTCAAAGATATCCAGATTAATGGAAATGATTATGTCTCCACTTATAATCAGCGATTTGTTGATAGCCCTAATGTTTACGGCATGATAGAAGCTGCTTATAACCAGATGATGGGAGAATTTGTTTGCAGTGGTGAGAGTGGATCTGGGAAGACCGAGACAGCTAAAATTGCTATGCAGTATTTAGCTGCTCTTGGTAATGGCAGTTGCGGGAGAGCAAATGATGTTCTTCAGACAAATTGTATACTAGAAGCTTTTGGGAATGCAAAAACATCTGTGAATGACAACTCTAGCAGATTTGGAAAGTTTATTGAAATTCTTTTCAGTACCACGGGTAAAATATGCGGGGCTAAAATTCAAACTTGTAAGTTAAAGGTTGTTCAACTGACCAGTGGTGAGAGGTCGTATCATGTATTTTATCAACTTTGTGCTGGATCTTCATCTGGTCTTAAAGAGAGACTGAATCTTAGAGCAGCCTGTGACTATAAATATCTAAATCAAAGTAACTGCATGGCAATTGGTGGTATTGATGATGCCAAAAACTTTCATCAGCTGATGAAAGCATTTAATGCTGTTTGGATTTGCAAAGAAGACCAAGAGCTGATATTTAAGATGCTTGCTGCAATACTATGGCTGGGAAATATATCATTCGAAGTTACTGACAGTGAAAATCACGTTGAGGTTGTGGGCGATGAAGCCGTAACCAGTGCAGCGCTGCTGATGGGTTGCAGTTCCCAGGAATTAATGACAGCTTTATCCACCCATAAAATCCAATCTGATAAGGATACTGTTGCCAAAAGTTTGACATTATTGCAGGCAATTGAAGCAAGAGATGCAATTGCCAAATTTATTTATTCAAGCTTGTTTGAATGGCTTGTACAACAAATTAACAAGTCACTTGAAGTGGGTGAAAAACATACCCAGAAATCCATTTGTATCCTTGATATTTATGGGTTTCAGTCATTTCAGAAGAACAAATTTGAACAGTTTTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTGTGAATCAGACGGCATAGATTGTACAGTATTAGATTTTGAAGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCTCTTGGTCTACTCTCTTTGTTGGATGAGGAATCAAATTTAGCTGAGGCTTCTGATTTAACATTTGCAAACAAACTTAGGAATCACCTGAATGCTAATCATTGCTTCAAAGGGGAAGGAGGAAGAGCTTTCAGTGTTCGTCACTATATGGGGGAGGTTTTGTATGATACAAATGGCTTTCTACAAAATAACAGAGATACATTGTCTTCTAATTCCATTCAACTCCTTTCATCATGTAATTGTGAACTGCTGAAGTTGTTCTCTGAAGTGTTTAACCAATCTGAGGAGCATGCAAATTCCACTTTCCATGATCAATTGTTCAAGTTGATGAATCAGTTGGAGAGCACTACTCCTTACTTTATTCACTGCATAAAGCCAAATACTAAGAAGCTTCCTGGAATTTATGACAACGAACTTGTCCTACAACAGCTCAGATGCTGTGGAGTTCTAGAAGCTGTTAGAATTTCAAGGGCTGGATATCCTACTCGAATGAACCATCAAGAGTTTTCCAGAAGGTACAAGTTTTTGCTTCTTGAATCTGATGTACCTCGGGATCCGTTGAGCATCTCTGTCGCAGTTTTGCAAAAATTTAATGTCCCTTCTGAAATGTACCAAGTTGGCTACTCAAAAATTTATCTTCGAGCAGGGCAGATTGATGCATTGGAGGATAAGAGAAAACAGCTTTTGCAGGGAACAATTAGGATTCAAAAATGCTTCCGTGGTCATCAAGCCCGCAGTTTTTTCTGTGAACTTCAGAATGGAGTTACAACATTACAATCATTTATTCGTGGAGAAATTACAAGAAGGAAACATGGTGATTTGGAGAAGTCTTCTATAACAATTTATTCTAAAAAACTTGAGGAGATTCATGCAATCATACTACTTCAATCTGTAATTCGTGGGTGGCTGGTTCGTAGGGATTGTAGTCACATCAATAAATTGAGGAAATATCATGAAAATGCAAAACCTAGACGAAAGTCTCGCGTTCAGATGCCAGAGGTGAAGGATTTGTCCAAAGAGATGGTTCAGAACTTGCCTTCAGCTTTAGCAGAACTCCAAAAACGGGTTTACAAGGCTGAAGCAATTGTGGAGCAAAAGGAAGAGGAAAATACTGAATTATGGGAACAGCTAAAACAGTCTGAGAGAAAGAGGATTGAATATGAGTTGAAGATGAAGTCAATGGAGGAGACATGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGTTGCTGCTAGAACGAGCCTTGCTTCAGAGAATAGCACTGTTCAACCTGTAAGGCATGATGTTGTGTCGCCTCGCTACTATGACTCTGAAGATGCTTCTTCCATGGGATCTCGAACAACTAGTGGGAACACACCTATGATAAAGTTATCTAGTAGTCTTTCTGTCTCTGATGTAGGGAGGCAGGCTAATGGTACTTTGACGACAGTCAGCAATCTGATGAAGGAATTTGAGCATCGAAGACAGACCTTCAATGATGAAGTTAAAGCTCTAAATGAGATTAAACCAGGGCAGTCTGCTGACACAAATTCTGCTGATGAACTTCGGAAACTTAAACAAAGATTTGAGGGATGGAAGAAACAATACAAGGTTAGATTGCGGGAGGCAAAAGCAAGGTTTTCCGAAACCGAAAAAAGTCGACGAACATGGTGGGGGAAATTTAGCTCGAGGGCATAA 3498 0.4037 MVSSASPCSLTRSSLEEMLDSLRRKDEGEANKKDSPPALPSRPASKARLPRAKRSLPNNFKVGSGGGVVKNGFNDNEESVESKRKETCLENKIRESSFGRKRVKKDVVESPYVAPICESGIVSELDGDTISYFIKMVTLNLEKGQWELGSIRSTSGEEASVSLSNGNVLKVARSEILPANPDILEGADDLIKLAYLNEPSVLYNLRFRYSRDMIYSKAGPILIALNPFKDIQINGNDYVSTYNQRFVDSPNVYGMIEAAYNQMMGEFVCSGESGSGKTETAKIAMQYLAALGNGSCGRANDVLQTNCILEAFGNAKTSVNDNSSRFGKFIEILFSTTGKICGAKIQTCKLKVVQLTSGERSYHVFYQLCAGSSSGLKERLNLRAACDYKYLNQSNCMAIGGIDDAKNFHQLMKAFNAVWICKEDQELIFKMLAAILWLGNISFEVTDSENHVEVVGDEAVTSAALLMGCSSQELMTALSTHKIQSDKDTVAKSLTLLQAIEARDAIAKFIYSSLFEWLVQQINKSLEVGEKHTQKSICILDIYGFQSFQKNKFEQFCINYANERLQQHFNRHLFKLEQEDCESDGIDCTVLDFEDNQECLDLFEKKPLGLLSLLDEESNLAEASDLTFANKLRNHLNANHCFKGEGGRAFSVRHYMGEVLYDTNGFLQNNRDTLSSNSIQLLSSCNCELLKLFSEVFNQSEEHANSTFHDQLFKLMNQLESTTPYFIHCIKPNTKKLPGIYDNELVLQQLRCCGVLEAVRISRAGYPTRMNHQEFSRRYKFLLLESDVPRDPLSISVAVLQKFNVPSEMYQVGYSKIYLRAGQIDALEDKRKQLLQGTIRIQKCFRGHQARSFFCELQNGVTTLQSFIRGEITRRKHGDLEKSSITIYSKKLEEIHAIILLQSVIRGWLVRRDCSHINKLRKYHENAKPRRKSRVQMPEVKDLSKEMVQNLPSALAELQKRVYKAEAIVEQKEEENTELWEQLKQSERKRIEYELKMKSMEETWQKQMASLQMSLVAARTSLASENSTVQPVRHDVVSPRYYDSEDASSMGSRTTSGNTPMIKLSSSLSVSDVGRQANGTLTTVSNLMKEFEHRRQTFNDEVKALNEIKPGQSADTNSADELRKLKQRFEGWKKQYKVRLREAKARFSETEKSRRTWWGKFSSRA 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02147 1165 ProSiteProfiles IQ motif profile. 834 863 IPR000048 GO:0005515
Car07g02147 1165 ProSiteProfiles IQ motif profile. 894 922 IPR000048 GO:0005515
Car07g02147 1165 Gene3D Kinesin motor domain 184 765 IPR036961 -
Car07g02147 1165 SMART MYSc_2a 179 833 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car07g02147 1165 Coils Coil 1133 1153 - -
Car07g02147 1165 MobiDBLite consensus disorder prediction 1045 1062 - -
Car07g02147 1165 SMART iq_5 856 878 IPR000048 GO:0005515
Car07g02147 1165 SMART iq_5 833 855 IPR000048 GO:0005515
Car07g02147 1165 SMART iq_5 893 915 IPR000048 GO:0005515
Car07g02147 1165 Gene3D Myosin VI head, motor domain, U50 subdomain 417 525 - -
Car07g02147 1165 PRINTS Myosin heavy chain signature 536 564 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car07g02147 1165 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car07g02147 1165 PRINTS Myosin heavy chain signature 589 617 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car07g02147 1165 PRINTS Myosin heavy chain signature 307 334 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car07g02147 1165 PRINTS Myosin heavy chain signature 215 234 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car07g02147 1165 ProSiteProfiles Myosin motor domain profile. 185 832 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car07g02147 1165 MobiDBLite consensus disorder prediction 17 33 - -
Car07g02147 1165 Coils Coil 1088 1108 - -
Car07g02147 1165 PANTHER MYOSIN-2 ISOFORM X1 116 1164 - -
Car07g02147 1165 MobiDBLite consensus disorder prediction 1 61 - -
Car07g02147 1165 PANTHER MYOSIN 116 1164 - -
Car07g02147 1165 Coils Coil 955 1003 - -
Car07g02147 1165 ProSiteProfiles IQ motif profile. 857 886 IPR000048 GO:0005515
Car07g02147 1165 MobiDBLite consensus disorder prediction 1 16 - -
Car07g02147 1165 Pfam Myosin head (motor domain) 188 820 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car07g02147 1165 CDD MYSc_Myo8 199 820 IPR036022 -
Car07g02147 1165 Gene3D - 360 416 - -
Car07g02147 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 919 IPR027417 -
Car07g02147 1165 Gene3D - 548 722 - -
Car07g02147 1165 Gene3D - 836 884 - -
Car07g02147 1165 MobiDBLite consensus disorder prediction 1042 1062 - -
Car07g02147 1165 Pfam IQ calmodulin-binding motif 896 913 IPR000048 GO:0005515
Car07g02147 1165 Pfam IQ calmodulin-binding motif 838 851 IPR000048 GO:0005515
Car07g02147 1165 Gene3D - 766 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02147 Car-Chr7 28494567 28514028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02147 1 1160 Myosins gene family AT5G54280 54.656 0.0 1313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02147 K10357 - gmx:100802074 1641.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02147 07 28494567 28514028 Car07g02147 07 28494567 28514028 ECH