Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02145 aTGACTGGAATAGGAAAAGGCAAGATTACAGTGATTAGTTTTGTTCCTGTTTTACTACTTGGATCAATTGCTGCAGCAATACATGGTGTTATTCTTCCTACATTTGGACTTTTGCTTTCATCAGCTATTAATACATTCTATAAACCTCCTGAGGAACTTAGAAAAGATTCTGAGTTTTGGTCACTTTTAATTTTTGGTTTGGGTTGTATTACCCTTGTGGCTATACCAATGCAGAACTACTTATTTGGGATTGCTGGTGGAAAACTTATAGAAAGGATTCGTTCATTGACATTTCAAAAGGTTGTGCGCCAAGAAATCAGTTGGTTTGATCATTCTTCAAATTCAAGTGGTGCAGTTAGTGCAAGGTTATCTACTGATGCTTCAACTGTGAGAACTCTTGTTGGTGATACATTGGCCCTCATTGTGCAAAACATAGCAACAGTCACAACAGGACTAGTTATAGCATTTAGTGCTAATTGGATCCTATCTTATGTGATTCTAGCTGTGTCACCCTTGTTGCTCATACAAGGATACATTCAAACCAAGTTTCTCAAAGGATTCAGTTCTGATGCAAAGGTGATGGATATGTATCAGAAGAAATGTTCAGCACCAGAGAAACAAGGTGTTAGGTTGGGACTTGTTAGTGGTATAGGATTAGGTGTCTCTTTCTTTGCTCTATACTGCACAAATGCTTTCTGTTTCTACATAGGATCAATTCTTGTGCAACACAGAAAAACAACTTTTGGAGAGGTTTTCAAGCGTGGAATCCCAGGAAGTGCTAGATGCCGAAATTTCATCTCGGGTTCTGCAGTTGATCAACGTAACTGA 828 0.3841 MTGIGKGKITVISFVPVLLLGSIAAAIHGVILPTFGLLLSSAINTFYKPPEELRKDSEFWSLLIFGLGCITLVAIPMQNYLFGIAGGKLIERIRSLTFQKVVRQEISWFDHSSNSSGAVSARLSTDASTVRTLVGDTLALIVQNIATVTTGLVIAFSANWILSYVILAVSPLLLIQGYIQTKFLKGFSSDAKVMDMYQKKCSAPEKQGVRLGLVSGIGLGVSFFALYCTNAFCFYIGSILVQHRKTTFGEVFKRGIPGSARCRNFISGSAVDQRN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02145 275 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 15 194 - -
Car07g02145 275 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 191 253 - -
Car07g02145 275 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 15 194 IPR039421 -
Car07g02145 275 SUPERFAMILY ABC transporter transmembrane region 15 252 IPR036640 GO:0005524|GO:0016021
Car07g02145 275 Pfam ABC transporter transmembrane region 19 190 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g02145 275 Gene3D ABC transporter type 1, transmembrane domain 10 254 IPR036640 GO:0005524|GO:0016021
Car07g02145 275 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 19 252 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g02145 275 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 191 253 IPR039421 -
Car07g02145 275 CDD ABC_6TM_Pgp_ABCB1_D2_like 16 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02145 Car-Chr7 28379461 28381144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02145 19 253 Calmodulin-binding Proteins AT2G36910 29.167 3.13e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02145 K05658 - gmx:100792531 381.333