Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02118 ATGGAAGAGAGAAATGGTGGTGACAAACTTGATGAAGTTATGCTTCCAGGTTTTAGGTTTCATCCAACTGATGAAGAACTAGTTGGATTTTACCTAAAGAGAAAGATTCAACAACGTCCTCTTGCTATTGAGCTCATCAAGCAGCTTGATATATATAAATTTGATCCTTGGGATCTTCCAAAGTTGGCAAGTACAGGGGAGAAAGAGTGGTATTTTTATTGCCCTAGAGACAGAAAGTATAGGAACAGTGCAAGACCTAATAGAGTAACAAGAGCTGGGTTTTGGAAAGCTACTGGAACAGATAGACCTATTTATTCCTCAGAGGGTTCTAAGTGTATTGGTTTGAAGAAATCCTTAGTTTTCTACAAAGGTAGAGCTGCTAAAGGGGTCAAAACTGATTGGATGATGCATGAGTTTAGACTTCCTTCTCTCAATGATTCATCCTCATCTCCAAAGAAATATGTAGACAAAACTATTCCAGCTAATGAATCTTGGGCAATCTGCAGAATATTCAAGAAAACAAATGCAACAGCTCAAAGAGCTCTCTCTCACTCATGGGTCCCTCCATTACTTGAAACATCAACCTCCAATCTTCTAACAAATGATGGAAATAACAACCAATTTTGTTCACAAAACATGATGTTGTTGGCCAAAAAACCAAACTTCACAAGCCAATTTTGTGCTACTAATAACCACAATACCACATCAAGTAATACTACACTTTGTCCTTTAAATATTCCATCTTATAATAATAAACCAATCATTGATCCATTGATTTACACACCCTTATACAAGTTACCAATTTCAAATGATCAAAACCTTAACAACCTTAGCACACATGGCTTATTATTCTCATCTCCTCTTGAAACATCTTCTACAAATTGTAACAAAACATCATCAATGGATGTTTCTTCTTTGCTATTGGGTATGTCATCATCTTCTTTCCTTGAAGGAGCAACAACCTCAAACTACATTGGTAGTTTACAAGACCACTACaataataataataataatggatatccaataatggctaataatataaatcctaatGTGAATGTGGCTGGTGTTAATGATGAAGAGTTGGAGAGAGAAAGATCCATTGGGTTTTCATATAGTATGCCTTTCAATGTTGGTGATGCATGGAAGTCAAGTCTTGTTTGGGATACTTCTTCTTGTACTTCGGATGAACCATCTGGTTATTCTACAACCAAGTGTTATACTTAG 1224 0.3513 MEERNGGDKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLAIELIKQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLNDSSSSPKKYVDKTIPANESWAICRIFKKTNATAQRALSHSWVPPLLETSTSNLLTNDGNNNQFCSQNMMLLAKKPNFTSQFCATNNHNTTSSNTTLCPLNIPSYNNKPIIDPLIYTPLYKLPISNDQNLNNLSTHGLLFSSPLETSSTNCNKTSSMDVSSLLLGMSSSSFLEGATTSNYIGSLQDHYNNNNNNGYPIMANNINPNVNVAGVNDEELERERSIGFSYSMPFNVGDAWKSSLVWDTSSCTSDEPSGYSTTKCYT 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02118 407 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 405 - -
Car07g02118 407 PANTHER PROTEIN FEZ ISOFORM X1 1 405 - -
Car07g02118 407 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Car07g02118 407 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Car07g02118 407 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
Car07g02118 407 SUPERFAMILY NAC domain 13 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02118 Car-Chr7 26733228 26735519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02118 1 323 NAC Transcription Factor Family AT1G26870 56.231 8.34e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car07g02118 NAM 6.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02118 - - vun:114179488 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02118 07 26733228 26735519 Car07g02118 07 26733228 26735519 ECH