Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02096 ATGGCATTCTTTCCAACAAACTTCATGCTACAAACTTCTCATCAAGATGATCATCAAACTCCACCTTCACTCAACTCAATTATAACCTCATGTGCACCCCAAGAATACCATGGAGGGGGAGTATCATTTTTAGGAAAGAGATCTATGTCATTTTCAGGGATAGAACTTGGAGAAGAAGCAAATGTTGAGGAAGAACTATCTGATGATGGATCACAATTAGGGGAAAAGAAGAGGAGGCTTAACATGGAACAAGTGAAGACACTTGAGAAGAGTTTTGAGTTAGGAAACAAGCTTGAACCTGAGAGGAAAATGCAACTTGCAAGGGCTCTTGGATTACAACCAAGACAGGTTGCTATATGGTTTCAGAACAGAAGGGCTAGGTGGAAGACAAAGCAATTGGAAAAAGACTATGATGTTCTTAAAAGACAATATGATTCTATTAAGGCTGATAATGATGCACTTCAAGCTCAGAACCAAAAACTTCAGACAGAGATATTGGCACTGAAAAGTAGAGAACCAACAGAATCAATAAACCTTAATAAAGAAACAGAGGGATCAAGCAGCAACAGAAGTGAAAACAGTTCAGAAATAAAGTTAGATATCTCAACAAGGACACAAGCTATTGATAGTCCCTTATCCACTCAACAAACAAGCAGAAACCTGTTTCCATCTTCTTCTAGACCAACAGGAGTTGCTCAACTCTTTCAAACCAATTCAAGGCAAGATCACATTCAGTGCCAAAAGATTAATGATCATATGGTTAAAGAAGAGAGCTTGAGTAACATGTTTTGTGGCATTGATGATCAATCTGGATTATGGCCATGGTTGGAGCACCAACACTTCAATTGA 849 0.3852 MAFFPTNFMLQTSHQDDHQTPPSLNSIITSCAPQEYHGGGVSFLGKRSMSFSGIELGEEANVEEELSDDGSQLGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQYDSIKADNDALQAQNQKLQTEILALKSREPTESINLNKETEGSSSNRSENSSEIKLDISTRTQAIDSPLSTQQTSRNLFPSSSRPTGVAQLFQTNSRQDHIQCQKINDHMVKEESLSNMFCGIDDQSGLWPWLEHQHFN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02096 282 CDD homeodomain 76 132 IPR001356 GO:0003677
Car07g02096 282 Coils Coil 123 171 - -
Car07g02096 282 MobiDBLite consensus disorder prediction 176 229 - -
Car07g02096 282 SUPERFAMILY Homeodomain-like 70 133 IPR009057 -
Car07g02096 282 MobiDBLite consensus disorder prediction 179 229 - -
Car07g02096 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 282 IPR045224 GO:0003700
Car07g02096 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 282 - -
Car07g02096 282 Pfam Homeobox associated leucine zipper 131 171 IPR003106 GO:0006355|GO:0043565
Car07g02096 282 ProSiteProfiles 'Homeobox' domain profile. 71 131 IPR001356 GO:0003677
Car07g02096 282 PRINTS Lambda-repressor HTH signature 102 111 IPR000047 GO:0003677
Car07g02096 282 PRINTS Lambda-repressor HTH signature 111 127 IPR000047 GO:0003677
Car07g02096 282 Pfam Homeodomain 76 129 IPR001356 GO:0003677
Car07g02096 282 Gene3D - 68 137 - -
Car07g02096 282 SMART HOX_1 74 135 IPR001356 GO:0003677
Car07g02096 282 ProSitePatterns 'Homeobox' domain signature. 106 129 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02096 Car-Chr7 26020728 26023386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02096 1 282 Homeobox Transcription Factor Family AT1G69780 61.745 3.88e-117 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Car07g02096 Homeodomain 6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02096 K09338 - gmx:100801479 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02096 07 26020728 26023386 Car07g02096 07 26020728 26023386 ECH