Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02088 ATGAAGAAATTATTCCTTTCTATCTATTCTCTATTTCCCACAATCATTCTTCTGCTACTTGTTCCAACTTCAAAAGCACAATTACCACAAACAGAAACTAGAATCCTCTTTCAAATCCAAAAACTTCTAGAATATCCACAAGTTCTTAAAGATTGGACAAATTGGACAAACTTTTGCTTCCTCCCTCCATCAACTTCACTCAAAATCATTTGTTCAAATGGTCATGTAACAGAATTAACTATCATTGGAAACAAAACCTCTCCCTCTTCACATAGCTCAAAACCCTTTCAAGCACTCTCAGGAACTTTTTCAACTGATTCATTTTTCACTGTTGTGACAAAGCTTTCAAATTTGAAGGTTCTGTCTTTGGCTTCATTAGGTTTGTGGGGTCCATTACCTGGAAAGATTAACAGGTTTTGGAATTTGGAAGTTTTGAACATTAGTTCAAATTTCATTTCTGGTGAAATTCCATCATCAATTTCTTCTATGAAAAATCTCAAGAGTCTTGTTTTGGCTGATAATCTTTTCAATGGAAATATTCCAGATCTCAAAAAGTTAACTTTGTTAGAAGAGATTAACTTTGATGGAAATAAATTAGGTCCTGATTTTCCTTCAATTGGAAATAATCTTGTTAATATTATATTGAGAAATAATCTTATAAGATCTCAAATTCCTTCTCAATTAGTAAAGTTTGATAAACTTCATGTATTTGATATTTCTTCAAATAATTTTTTTGGAAAAATTCCTAAATTTATGTTCTCTTTACCTTCCCTTAAGTACCTAAATTTATCTTCAAATAAATTTAGTAGTAACCTTTCATTGAATTTAGCTTGTGGTTCATCACTTACATATGTTGATATCTCACACAATTTTCTAGTTGGAAAATTACCATCATGTGTTATGTCATCAAAAGCTAAAGTAATATATTCATGGAATTGTTTTTcaacaacaaaacaacaacaTTTATCTTCATATTGTAAAAAAGATGCAGCCTTAGCTGTTAAGCCTCCTGGTAAAAAGGTGAAGAAGGAATCAAATATGAAACTAGGAATTGTGCTTGTTATAATTGGAGGTGTTGTTGGAGTTGCTTGTCTTTTAGCTTTAATCATTGTGTTCATCTTGTGGAAGTCCAAATCAGAAAGATCTGTTGCTCATAAGCTTTCAGAAAAATCAAATATTGATGCAAGGCATGTTCCTCGAACAATGAGGCTAGGTGTACTTGGACAGCTACCATATCATATTTTCAATGAAGAAGAAATTGAAGAAGCAACAAATAACTTTGAACAATCAAATCTAATAGGAGAAGGGTCACAAGGACAGATATATAAAGGCTGGTTGAGAGATGGTTCAGTGGTGCATGTTAATCGTATTAACATAAAGCAAAAGGGTTTACCTCACAGCATTATGAAGCACTTAGAGGTATTGCAAAATTTGAGGCATAGGCATATGGTGAGTGTTTTAGGACATTGTGTCATTACTCATCAGGACCCTCCACAAGTAACAAGCACAGTGTTCATTGTACTTGAATACATTTCAAATGTGTCATTGAGGGATCAACTTACAGATGGGAAAAAGAGGGATATGTTGAAATGGCCACAAAGAATGGCAATAAGCATAGGAATTGCAAGAGGAGTTCAGTTCTTACATACAGGAGTTGCACCTGGCATATTTGGCAACAATTTGAAGATTCAGAATATTTTGTTGGATGATAGTCTCAATGCAAAAGTCAGTGGTTACAGAATTCCATTGCCATCCAAGAGCATACTTAATGAACAAAGTGCCACAAATCAAATTGGCAGCACAAATAATGCTGAAAAAGAAGATATATATCAGCTGGGTGTTATTCTACTTGAAGTCATTACTGGTAGACAAATTGGATCCTCCAGTGAAGTAGAGAAGCTCAAGGATGAGTTGGAAAGTAGTTTATCAGAAACAGCATCAATACTAAGAAGTGCAATTGATCCTTCCCTAAGGGGAAGTTATGCATATGAATCAATGAGAACTGCAATTCAAATTACCATCAATTGTCTCTCTAAGGTTTCTAGTAAGCGTCCTTCAATAGAAGATGTTCTATGGAATTTACAGTATTCAATGCAAGTTCAAGAGTCTTGGACCAGCAGTGGCAACCTCAGTACAAAATTTTAA 2145 0.3361 MKKLFLSIYSLFPTIILLLLVPTSKAQLPQTETRILFQIQKLLEYPQVLKDWTNWTNFCFLPPSTSLKIICSNGHVTELTIIGNKTSPSSHSSKPFQALSGTFSTDSFFTVVTKLSNLKVLSLASLGLWGPLPGKINRFWNLEVLNISSNFISGEIPSSISSMKNLKSLVLADNLFNGNIPDLKKLTLLEEINFDGNKLGPDFPSIGNNLVNIILRNNLIRSQIPSQLVKFDKLHVFDISSNNFFGKIPKFMFSLPSLKYLNLSSNKFSSNLSLNLACGSSLTYVDISHNFLVGKLPSCVMSSKAKVIYSWNCFSTTKQQHLSSYCKKDAALAVKPPGKKVKKESNMKLGIVLVIIGGVVGVACLLALIIVFILWKSKSERSVAHKLSEKSNIDARHVPRTMRLGVLGQLPYHIFNEEEIEEATNNFEQSNLIGEGSQGQIYKGWLRDGSVVHVNRINIKQKGLPHSIMKHLEVLQNLRHRHMVSVLGHCVITHQDPPQVTSTVFIVLEYISNVSLRDQLTDGKKRDMLKWPQRMAISIGIARGVQFLHTGVAPGIFGNNLKIQNILLDDSLNAKVSGYRIPLPSKSILNEQSATNQIGSTNNAEKEDIYQLGVILLEVITGRQIGSSSEVEKLKDELESSLSETASILRSAIDPSLRGSYAYESMRTAIQITINCLSKVSSKRPSIEDVLWNLQYSMQVQESWTSSGNLSTKF 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02088 714 ProSiteProfiles Protein kinase domain profile. 427 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02088 714 Pfam Leucine Rich Repeat 141 162 IPR001611 GO:0005515
Car07g02088 714 Gene3D Transferase(Phosphotransferase) domain 1 511 709 - -
Car07g02088 714 PANTHER OS07G0166700 PROTEIN 4 707 IPR045272 GO:0004714|GO:0006468
Car07g02088 714 SUPERFAMILY Protein kinase-like (PK-like) 408 694 IPR011009 -
Car07g02088 714 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 4 707 - -
Car07g02088 714 SUPERFAMILY L domain-like 31 301 - -
Car07g02088 714 Pfam Protein kinase domain 427 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02088 714 Gene3D Ribonuclease Inhibitor 30 204 IPR032675 -
Car07g02088 714 Pfam Leucine rich repeat 233 290 IPR001611 GO:0005515
Car07g02088 714 Gene3D Phosphorylase Kinase; domain 1 391 499 - -
Car07g02088 714 Gene3D Ribonuclease Inhibitor 205 334 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02088 Car-Chr7 25736097 25740200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02088 24 650 Miscellaneous Gene Families AT2G02780 48.198 3.18e-180 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Car07g02088 Pkinase 7.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02088 - - cam:101490224 1327
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02088 07 25736097 25740200 Car07g02088 07 25736097 25740200 ECH