Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02086 ATGGAAGATCATAATAACATCTTGAAGTCTAACGAGGGTGAAGACAATGGTAGCAATTATAAGCATGATCAAAAGCTTGAATCAACAAATAAGAAAATTGTTGAGACCAAAGAAGAAAATGAGAGGTTGAAACTGACACAGTTTGCAAAGAATTACCAAGCAATGCATATGGACTTCTTCAACATCATTCAACATGATAAACAAGAAGTTGTAACCAAATCAATAAGTAGCCATGAAGAAAGTGAACTTGTGTCCCTTTCATTAGGTATTTCATCCATAGGCCATCCCATAGATGACAAAAAGAATAGAAATGAAACAAAAAATATCAAAGAAGATGAGAATTTTGATGAAGGACTTGCTCTTAGGTTAAATATCACATTTGACCCTTCATCAACAACTAAGGAAGGGAAGGAAGAGGAACTCACTAAGAAATGGTCACCAAACAAAGTTTTGAAGACAACAAGAACCGGAGATATAACTACAGAAGTTTCTCAATATTCTCAACTCAAGAAAACTAGGGTTTGTATTAGAGCCAGATGTGATACTCAAACGATGAATGATGGAGGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCGTGCCCTCGAGCATATTATAGATGCACTGTCTCTCCATCTTGTCCTGTGAGAAAACAGGTTCAAAGATGTGCTGAAGACATGTCAATCTTGATTACCACCTATGAAGGGACTCATGACCATTCTCTACATACTTCAGCCACAGCCATGGCCTACACAACTTCTGCAGCTGCTTCCATGCTTAAGTGTTCTTCATTCACCTCACAACAAGGACTAACCAATTCAAATACATTCCCAATCATCAATTCCAATTTTTCTTATAACCTTAATCCCCCAAATTGTACATCAACTTCAAAGAAGTTTCCAATCCCACAACAATTATACTTTCAAAACTCTTCTATTTCTTCCCTTAATTCTCACCCAACAGTCACTCTTGATCTTACTACACCTCAAACTCCATTTCCCATTGGCAAATTCAACACACCTTTTCCATCCACCCAAAAAAGTTCATCAACAAACCCTAATCTTTCATCAACTATCACACCTTTCCAATCTTGTATGTTACCATCAACTTTGAGTCCTTATAGTGGACATTTCAACTATGGAGGACTAATCAACCAATATGGAAATCAAGCATTTCAAGGACATGTATACCAACCTAGTTATATGATGAGTAACCATGCCATTTCTCAACAACCTTTAAGAGATTCAATTGTGGCCACAACCAAGGCAATTACAACAAATTATCCAAAATTTCAGTATGCCTTAAAAGCTGCTCTCACAACATATGTTGGTAGCAATGAATTTTCTTGTGATGGAGTAAAAGAAAATCATGTTGTGGCTGAGAATGAAGCTTTGAACTTAAAGCTAGGTGGAGATAGGTCATATTCAAAGAACACTACTTGTAATGTTCAAAAAGGAAACATGTTCAAATTTCCACCATCACAACAATAA 1500 0.3633 MEDHNNILKSNEGEDNGSNYKHDQKLESTNKKIVETKEENERLKLTQFAKNYQAMHMDFFNIIQHDKQEVVTKSISSHEESELVSLSLGISSIGHPIDDKKNRNETKNIKEDENFDEGLALRLNITFDPSSTTKEGKEEELTKKWSPNKVLKTTRTGDITTEVSQYSQLKKTRVCIRARCDTQTMNDGGQWRKYGQKIAKGNPCPRAYYRCTVSPSCPVRKQVQRCAEDMSILITTYEGTHDHSLHTSATAMAYTTSAAASMLKCSSFTSQQGLTNSNTFPIINSNFSYNLNPPNCTSTSKKFPIPQQLYFQNSSISSLNSHPTVTLDLTTPQTPFPIGKFNTPFPSTQKSSSTNPNLSSTITPFQSCMLPSTLSPYSGHFNYGGLINQYGNQAFQGHVYQPSYMMSNHAISQQPLRDSIVATTKAITTNYPKFQYALKAALTTYVGSNEFSCDGVKENHVVAENEALNLKLGGDRSYSKNTTCNVQKGNMFKFPPSQQ 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02086 499 MobiDBLite consensus disorder prediction 1 35 - -
Car07g02086 499 Pfam WRKY DNA -binding domain 186 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g02086 499 Gene3D WRKY domain 172 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g02086 499 PANTHER WRKY TRANSCRIPTION FACTOR 72B 23 483 - -
Car07g02086 499 SMART WRKY_cls 185 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g02086 499 ProSiteProfiles WRKY domain profile. 180 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g02086 499 Coils Coil 26 46 - -
Car07g02086 499 SUPERFAMILY WRKY DNA-binding domain 178 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g02086 499 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 483 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02086 Car-Chr7 25676661 25681282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02086 33 333 WRKY Transcription Factor Family AT5G15130 46.407 3.61e-66 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car07g02086 WRKY 3.9e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02086 07 25676661 25681282 Car07g02086 07 25676661 25681282 ECH
Car07g02086 07 25676661 25681282 Car07g00967 07 8519868 8524266 ECH