Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02084 ATGTCGCATTTGCATTTGCAGTTGcagcaacactcaccagcaccaacatcactctcatcatcatcatcttcttcttcaattttttcttctcttAAACTTTGCACAAACAACTATTTTTCTCCAAAGTCTCTTTCTTTTAAACCCCTCACTCTCACCCAACCAATCAGATGCCGCCACTCTGACCTCTTCGAAACCAGAACCAACTCTTCCACTTCCACCCCCAATCCTTCAGTTGGAGCATTGCCACCTAGGGTTTATGTTGGTCATTCAATTTACAAAGGGAAGGCTGCACTCACTATCACTCCGAGACCACCGGAATTCATGCCGTTGGATTCAGGGGCATATAAGATATCTAGGGATGGTTATCTGCTGCTTCAGTTTGCGCCATCCGTTGGTCCGCGCCAATATGATTGGAATAGGAAACAGGTGTTCTCGTTTTCGGTGGTTGAAATGGGAACTGTGATTAGCCTTGGATCAAGGGAGTCTTGTGAATTTTTTCATGATCCTTCGAAGGGAAAAAGTGATGAAGGCAAAGTCAGAAAGGTTTTGAAGGTTGAGCCTTTTCCGGATGGTTCTGGTTTCTTCTTTAACCTCAGTGTTCAAAACAAGATTGTGAACGTTGATGAAAGCATCACTATCCCTATAACCAAAGCAGAGTTAGCAGTTTTGAGCACAATTTTCAAGTTTATCATGCCATACCTTCTTGGTTGGCATACCTTCGTGAACGCCATAAATCCTAATCCTGAGTATTCTGCTGTGGTGAACAATGCCAACCCAAAATATGGAGGAGACTATGAATGGACCAGATAG 810 0.3988 MSHLHLQLQQHSPAPTSLSSSSSSSSIFSSLKLCTNNYFSPKSLSFKPLTLTQPIRCRHSDLFETRTNSSTSTPNPSVGALPPRVYVGHSIYKGKAALTITPRPPEFMPLDSGAYKISRDGYLLLQFAPSVGPRQYDWNRKQVFSFSVVEMGTVISLGSRESCEFFHDPSKGKSDEGKVRKVLKVEPFPDGSGFFFNLSVQNKIVNVDESITIPITKAELAVLSTIFKFIMPYLLGWHTFVNAINPNPEYSAVVNNANPKYGGDYEWTR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02084 269 Pfam Whirly transcription factor 91 225 IPR013742 GO:0003697|GO:0006355|GO:0006952
Car07g02084 269 Gene3D Transcriptional Coactivator Pc4; Chain A 77 248 IPR009044 GO:0003677|GO:0006355
Car07g02084 269 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 30 269 - -
Car07g02084 269 SUPERFAMILY ssDNA-binding transcriptional regulator domain 83 269 IPR009044 GO:0003677|GO:0006355
Car07g02084 269 MobiDBLite consensus disorder prediction 1 21 - -
Car07g02084 269 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 30 269 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02084 Car-Chr7 25581617 25585298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02084 16 269 Whirly Transcription Factor Family AT1G14410 62.692 4.22e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Car07g02084 Whirly 8e-60 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02084 - - gmx:100789252 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02084 07 25581617 25585298 Car07g02084 07 25581617 25585298 ECH
Car02g00708 02 9405270 9408837 Car07g02084 07 25581617 25585298 PCT