Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02083 ATGAGTTCCTACCACATGTTTCACACTTCCTTTCACTTTCTTACATTTCCATGCACAAAGCCGCCGCCACCACCACTCAACATTCATCTCTTCCTTTCCCTTCGTTCAAACACAAAAACCACTTTCCTTTCCTCATCACTCAACGACGACTCATTTTCCAACCCTAAATCAAACCAGTTTGGTTACGGTTCTTCAGAGGATCTGTTTGGGCTGGAGGTGGAATTCAAACCAAGGAAAGCTAACTCCCATTTAAGAGAACCAAGGTCTTGGTTTGGTCCAAATGGACAATATATCAGAGAGTTACCTTGTCCAAGTTGCAGAGGAAGGGGTTATACTCCTTGTACTGAATGTGGAATAGAAAGATCTAGATCCGACTGTCCAAAATGTAATGGAAAGGGTTTACTAACTTGCAACCAGTGCTCTGGAGATTGTGTTATATGGGAAGAATCAATTGATGAACGACCATGGGAGAGAGCTCGCTCAATATCTCCACTCAAAGTGAAGGAAGATGATGAAGTTGACAAATTGGAAATAAAGCTAGATGCGAAGAAAAAATCCAAGCGTGTTTACCAGTCACCGAGTCCTGAAGTTGGACTGAAGATTAGTCGTTCATTAAAAAGTCTCAATGCTAAAACTGGTCTATTTAGCAAACGAATGAAGATCATCCACCAGGATCCAATGCTTCGGACACAGCGAGTGGCTGCTATTAAGAAAGCCAAGAGAACTGTTTCAGCAAGAAAGCATGCTTCCAAAACTATGAAAGCTTACTTTAGTGATCCAATAAACCGTCAGAAAAGAAGCGTGGCGATGAAAGGAGTGAAATTCTACTGCCATAACTGCGGACGTGAAGGACATAGGAGAAACTACTGTCCAGAACTCAATGGTTTGATTGATAGGCGATTCACATGTAAACTATGCGGCGAAAAAGGACACAACAGAAAAACATGCATTAAGTCAAAGATAAGCCAAAGTGATGAGAGTTTTAAAAGACATCGTCGATGTAGAATATGTCGACGATATGGCCATAACCGACAGACGTGCCCTCAAGTTGTTTCTAATCCAATAAAGGCCACGAGACGCGAAGGACATAGGAGAAACTACTTCCCAAAACTCAAGGATGGTTTGGTTGATAGGCGATTCACATGTAAGCTATGCGGCGGAAAAGGCCACATAAAAAAAACATGCATTAAGTTAAGGATAAGCCATATTGATGGAAGAGTTATAAAACATCGTCGATGTAGAGTATGTCGACAATATGGCCATAACCGACAGACATGTCCTCAAGTTGTTTCTAATCAAAGAATGGCCACTGCATCTCGAAAAGTATACCATTGTCGACTGTGCCGAAAAGAGGGACACAATAGTAGGAGATGTCCTAGAAGAATAGTAGGTACTGAACAGTCTCAAGAGTAA 1413 0.4161 MSSYHMFHTSFHFLTFPCTKPPPPPLNIHLFLSLRSNTKTTFLSSSLNDDSFSNPKSNQFGYGSSEDLFGLEVEFKPRKANSHLREPRSWFGPNGQYIRELPCPSCRGRGYTPCTECGIERSRSDCPKCNGKGLLTCNQCSGDCVIWEESIDERPWERARSISPLKVKEDDEVDKLEIKLDAKKKSKRVYQSPSPEVGLKISRSLKSLNAKTGLFSKRMKIIHQDPMLRTQRVAAIKKAKRTVSARKHASKTMKAYFSDPINRQKRSVAMKGVKFYCHNCGREGHRRNYCPELNGLIDRRFTCKLCGEKGHNRKTCIKSKISQSDESFKRHRRCRICRRYGHNRQTCPQVVSNPIKATRREGHRRNYFPKLKDGLVDRRFTCKLCGGKGHIKKTCIKLRISHIDGRVIKHRRCRVCRQYGHNRQTCPQVVSNQRMATASRKVYHCRLCRKEGHNSRRCPRRIVGTEQSQE 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02083 470 Gene3D - 406 462 - -
Car07g02083 470 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 32 353 - -
Car07g02083 470 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 360 462 - -
Car07g02083 470 SMART c2hcfinal6 381 397 IPR001878 GO:0003676|GO:0008270
Car07g02083 470 SMART c2hcfinal6 276 292 IPR001878 GO:0003676|GO:0008270
Car07g02083 470 SMART c2hcfinal6 444 460 IPR001878 GO:0003676|GO:0008270
Car07g02083 470 SMART c2hcfinal6 302 318 IPR001878 GO:0003676|GO:0008270
Car07g02083 470 SMART c2hcfinal6 412 428 IPR001878 GO:0003676|GO:0008270
Car07g02083 470 SMART c2hcfinal6 333 349 IPR001878 GO:0003676|GO:0008270
Car07g02083 470 ProSiteProfiles Zinc finger CCHC-type profile. 277 292 IPR001878 GO:0003676|GO:0008270
Car07g02083 470 SUPERFAMILY Retrovirus zinc finger-like domains 408 461 IPR036875 GO:0003676|GO:0008270
Car07g02083 470 Gene3D - 271 321 - -
Car07g02083 470 Gene3D - 327 405 - -
Car07g02083 470 SUPERFAMILY Retrovirus zinc finger-like domains 274 319 IPR036875 GO:0003676|GO:0008270
Car07g02083 470 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 360 462 - -
Car07g02083 470 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 32 353 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02083 9 404 C2H2 Transcription Factor Family AT5G20220 57.143 3.17e-151 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02083 - - cam:101493936 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02083 07 25550139 25555412 Car07g02083 07 25550139 25555412 ECH