Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02081 ATGGAGCTTGCTCTTGTGAAATCTGAACTAAGTCCAAGAAGTAATAGATTGCTTGTGCTGGATGCTGATTCTATTCAAACAACAAAAAGTGTCAAAAGGCGGCGAAGAGATTCGTCTATTGCGGTGTTAGGGGGGATTGAACAAGGTAATTTAACAGAAGAACAGCAGCCACTAAGTGGTAATGTATCAACTGCAGCAACCACTGTGAAGAGAAGCTCAAGGTTTAGGGGTGTTAGCAGACATAGATGGACGGGAAGGTATGAAGCTCATTTATGGGATAAAGGGACATGGAATCCTACTCAAAAGAAAAAAGGAAAGCAAGTATATTTGGGAGCTTATAATGATGAAGAAGCTGCTGCTAGAGCTTATGATTTAGCTGCCCTGAAGTATTGGGGAACATCAACTTTTACAAATTTCCCTGTATCTGATTATGATAAAGAAATTGAAATAATGATAACTATGACCAAAGAAGAGTATCTTGCTTCTTTAAGAAGGAGGAGCAGTGGTTTTTCTAGAGGTGTATCAAAATATAGAGGAGTAGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGGATTGGGAGAGTGTTCGGCAACAAGTACCTCTACCTTGGGACTTACGGTACACAAGAAGAAGCGGCTCGCGCATACGATATTGCAGCAATTGAATACAGAGGAATAAATGCCGTGACAAACTTTGACTTGAGCACCTACATCAGATGGTTAAGGCCGGGAGCACATTCTACTACTTCACAAGAGCATCAAAAGCCAAGCACAGACCCTCAACCATTTGCAGCCTCTAATTCTATCCAAACAAGAGCAAACATTGAAATATCCAACTCCAACATTAATCCATTCCATGCAAGTGAAGTTGAAAATACAAAAAAGCAAGACTTTTGCAAGTCTATGACCCCATTAAGTCCTTGCAATAAGCCATCATCACCAACAGCATTAGGACTTCTCCTAAAATCCTCAGTGTTTAGAGAACTAATGCAGAGAAATCTTAATTCTTCTAATGAAGATGACGAAGAAGTTGAATTGAAATACCCCCAAGAGGGGATTGGAGGGTTTTTTGATATTGACAACAGCAACACTTACTTGTGCTCTTCTAATATCAATAGATTGCCCAACTTGGAGTCATCAGAAGAGAGGTCATTGCCTATGTATCATGGAACTGTGCAATCCTTATGGAATGGTGCTTCCAACATATCTAACTGA 1218 0.4031 MELALVKSELSPRSNRLLVLDADSIQTTKSVKRRRRDSSIAVLGGIEQGNLTEEQQPLSGNVSTAATTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAALKYWGTSTFTNFPVSDYDKEIEIMITMTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGAHSTTSQEHQKPSTDPQPFAASNSIQTRANIEISNSNINPFHASEVENTKKQDFCKSMTPLSPCNKPSSPTALGLLLKSSVFRELMQRNLNSSNEDDEEVELKYPQEGIGGFFDIDNSNTYLCSSNINRLPNLESSEERSLPMYHGTVQSLWNGASNISN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02081 405 CDD AP2 175 236 IPR001471 GO:0003700|GO:0006355
Car07g02081 405 ProSiteProfiles AP2/ERF domain profile. 74 140 IPR001471 GO:0003700|GO:0006355
Car07g02081 405 ProSiteProfiles AP2/ERF domain profile. 176 234 IPR001471 GO:0003700|GO:0006355
Car07g02081 405 Gene3D AP2/ERF domain 73 142 IPR036955 GO:0003700|GO:0006355
Car07g02081 405 Gene3D AP2/ERF domain 175 236 IPR036955 GO:0003700|GO:0006355
Car07g02081 405 Pfam AP2 domain 175 226 IPR001471 GO:0003700|GO:0006355
Car07g02081 405 Pfam AP2 domain 73 132 IPR001471 GO:0003700|GO:0006355
Car07g02081 405 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 399 - -
Car07g02081 405 SUPERFAMILY DNA-binding domain 73 142 IPR016177 GO:0003677
Car07g02081 405 SMART rav1_2 176 240 IPR001471 GO:0003700|GO:0006355
Car07g02081 405 SMART rav1_2 74 146 IPR001471 GO:0003700|GO:0006355
Car07g02081 405 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 399 - -
Car07g02081 405 SUPERFAMILY DNA-binding domain 175 236 IPR016177 GO:0003677
Car07g02081 405 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Car07g02081 405 PRINTS Ethylene responsive element binding protein signature 216 236 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02081 Car-Chr7 25524914 25527744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02081 170 249 AP2-EREBP Transcription Factor Family AT5G57390 39.773 9.39e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Car07g02081 AP2 7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02081 - - gmx:100799621 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02081 07 25524914 25527744 Car07g02081 07 25524914 25527744 ECH