Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02075 ATGGGGTTAGGTGGTGAGAATGAGAATGGTAAGGTGACAGAGTCTTTGGATGTGTGTAAATCAAAAGGGAGAaagaagaagaagaaacaagatggggtagttcaaaatgaagaagaaACTGGTTGTTGGCTTAGTTTCAGGTTCATTGGTAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCTGTTAGTGGCACCAGTACTAATTATGCTGAAAGTAAATCAACTATTGATACAAGTAGAGACCAACCAATGCTTCCGGTAGTCTCTTCGACAACCACTAGTAATGCTGAAAGCAATTCATCCACTTCAAAACTCGAAGAGGAGCTTAAAGTTGCTTCCAGGCTGCGAAAGTTCTGTTTCAATGATCTTAAGTTGGCAACAAGAAATTTTCGGCCCGAGAGTCTTCTCGGTGAAGGTGGGTTTGGTTGTGTGTTCAAAGGATGGATTGAAGAAAATGGAACTGCTCCGGTGAAACCTGGCACAGGACTTACCGTTGCTGTGAAAACCCTTAACCACGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTATCTCGGTGATTTAGTTCATCCACACCTCGTCAAACTTATAGGCTATTGTATCGAAGATGATCAAAGGTTGCTTGTATATGAATTTATGCCTCGTGGAAGCCTGGAAAACCACTTGTTTAGGAGATCGTTGCCTCTCCCGTGGTCCATTAGAATGAAAATTGCACTAGGAGCTGCAAAGGGACTTGCTTTTCTTCACGAGGAAGCCGAACGGCCAGTAATATATAGGGATTTCAAAACTTCCAATATACTATTGGATGCAGATTACAATGCCAAGCTCTCAGACTTTGGACTTGCAAAAGACGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACTTATGGTTATGCTGCACCGGAATATGTCATGACAGGGCATCTTACATCAAGAAGTGATGTGTATAGTTTTGGAGTGGTACTACTTGAGATGATAACCGGTCGAAGATCTATGGACAAAAACCGGCCGAACGGTGAACATAACCTTGTGGAATGGGCTAGACCGCATCTAGGAGAGAGAAGAAGGTTCTACAGGTTGATAGACCCTCGCTTGGAAGGTCACTTCTCGATAAAAGGAGCTCAGAAAGCTACCCATTTGGCTGCTCACTGCCTTAGCCGAGATCCTAAAGCAAGACCACTAATGAGTGAAGTTGTAGAAGCCTTGAAGCCTCTACCAAACCTTAAAGACATGGCTAGTTCATCGTACTATTTCCAGACAATGCAAGCCGACCGTTTTAGTGCAAGTCCGAATACTCGAAACGGGAGAACACAAGGAGCATTGCTAGCTCGAAATGGACAACAAAGGAGCCTTTCCATATCACATGGTACTCATGCTTCTCCATTTCACCATCAGTATCCTCAACATTCACCAAAACCAAGTGGAAAGGCACAAAGTTGA 1467 0.4267 MGLGGENENGKVTESLDVCKSKGRKKKKKQDGVVQNEEETGCWLSFRFIGSCISSRSKVDSSVSGTSTNYAESKSTIDTSRDQPMLPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFCFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNYLGDLVHPHLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMITGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKATHLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTQGALLARNGQQRSLSISHGTHASPFHHQYPQHSPKPSGKAQS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02075 488 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 62 476 - -
Car07g02075 488 MobiDBLite consensus disorder prediction 1 32 - -
Car07g02075 488 ProSitePatterns Protein kinases ATP-binding region signature. 137 169 IPR017441 GO:0005524
Car07g02075 488 SUPERFAMILY Protein kinase-like (PK-like) 117 434 IPR011009 -
Car07g02075 488 CDD STKc_IRAK 137 414 - -
Car07g02075 488 MobiDBLite consensus disorder prediction 57 103 - -
Car07g02075 488 Gene3D Transferase(Phosphotransferase) domain 1 217 433 - -
Car07g02075 488 Pfam Protein tyrosine and serine/threonine kinase 135 411 IPR001245 GO:0004672|GO:0006468
Car07g02075 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Car07g02075 488 PANTHER OS01G0588500 PROTEIN-RELATED 62 476 - -
Car07g02075 488 ProSiteProfiles Protein kinase domain profile. 131 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02075 488 Gene3D Phosphorylase Kinase; domain 1 111 216 - -
Car07g02075 488 MobiDBLite consensus disorder prediction 454 488 - -
Car07g02075 488 MobiDBLite consensus disorder prediction 57 106 - -
Car07g02075 488 MobiDBLite consensus disorder prediction 454 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02075 Car-Chr7 25379044 25383011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02075 100 411 Glycoside Hydrolase AT3G07070 56.467 4.83e-118 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car07g02075 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02075 - - gmx:100807510 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02075 07 25379044 25383011 Car07g02075 07 25379044 25383011 ECH