Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02064 ATGATGAACCCATTCACTAGTCTCTTTCTTTTTTCGCTCTCAGTGCATTGTTTCGTAGCTTGCTTAGCTTCAAATACAAAAAACATCACCACAGATGAATTTTCTCTTTTAGCATTCAAATCCCTCATTACTTTAGACCCCTTTAACATTTTATCAAATAATTGGTCAACTTCCTCTTCTTTATGCAATTGGGTTGGTGTCACTTGTGATGAGAAACACAATAGAGTCCATACTTTGAATCTCAAAAACATGGGTCTTAGAGGTACCATTTCCCCAAACTTGGGAAATCTTTCGTTCCTCGTTATACTCGACCTTAGCGGCAATAGCCTTCAAGGTCAAATTCCTAAAGAGATTTTTTTGTTGCGTCGGTTGAAAGTTCTTGATATAAGTTATAATGAATTTGTTGGAGAAATTCCTACCGAGTTAGGAGACTTGACTGAACTTCAAAATTTGTACCTTGGCATTAACAATTTTAGTGGTTTAATCCCACAATCTATACACAAGTTGTCTAAGTTAGAGCAATTTGATTGTGCAATAAATTTGTTCCAAGGAAGCATTCCACTTGTGATTGGTCAACTTAGTCGGCTGGAAGTTTTGGATTTAAGTTATAACATGCTGTCCGGACACATACCTCAATCAATTACCAACTTAACTTCACTTCAAGAAATGTATTTGTCTTCTAACTACTTTTCAGGAGAAATTCCAAAAGGGATATTGGGTGATCTTAGTCAGCTGAGAACAATGGAACTTGATAATAATCAGCTTTCAGGCAACATATCATCGATATTAAAATTTAACAACTCATTGTTACAAGATTTTAATCTTGGATATAATAATTTGTCCGGCAATCTTCCATCAAATATCTGTCAAGGGCTTCCAAATCTTAGATATCTTAATCTTTATTATAATGAACTTTCTGGTGACATGCCAACTATTTGGCATCAATGTGAAGTGTTGGACGAATTAGAGCTATCATACAATAGTTTCAATAAAGGACCGATGCCACTTGGCATCCGAAACATGACCAAACTTCGATATCTTCATCTTTGTGGCAACAACTTGGAAGGTAACATTCCATCTCTTTACAACATGACTTCTTTAAGGGTGGTCAGATTTGACGAAAACTATTTAAATGGAAGTCTACCAAATGATTTTTTCAATCAGCTTCCTAAACTTGAAAATTTTACTTTATACTCCAATCAATTTCAAGGAAGCATTCCACAATCAATTGGCAACTGCTCATCATTGATATTCTTGGGTTTAGCAGGGAACTTTTTCACAGGTTCGTTACCGAAGGAGATTGGGTATGTTGATCAACTTAAGTTTCTAATATTGGCAAACAATAGCTTTAGTGGCTCTATTCCTTCCAAACTCTTCAACATGTCAAAATTAACATACTTGCATCTTGAACAAAACTATTTCTCAGGCATTATTCCATCAAATAAGGGATATACCCTTCCTAGCCTACAACAACTACACTTGAGTCTAAACAATTTTGTTGGAAATATTCCAATTAACATATGCAATGCTTCTAACCTCATTCAATTTCAAGTGAGTTACAATTCATTCAGTGGAACTCTACCCAATGCTTTTGGAAATTTAAGGTTCCTTGAAGGGTTTCTCATAAATGACAATGATTTGATAATACATGATTCTCTTCAATTATTTACTTCCTTGACAAATAGTAGATATTTGAAGTATTTAGATGTATCAAGGAATCATATACATTCCAATCTTCCTAAGTCAATTGGAAACCTAACTTTAGTATCCTTTGGAGCAGATTCATGTGGAATTGATGGTAATATTCCATTAGAAATTGGAAACATGACCAACTTGCTATCTTTGAATCTAAATGGTAATAATTTAAATGGATCAATACCTAGAACATTCAAAGAGTTACACAAACTTCAGGTATTGGATCTTGGCTACAATGGACTACAAGGATCATTTATTGAGGAGCTTTGTGAGATTGAGAGTTTGAGTGAGTTGAATCTAGAAAATAATAAGCTATCTGGAGTTTTACCAAAATGTATGGTAAAAATGACTTCTCTTAGAAAACTACACATAGGATCTAATAGTTTGAACTCTAGGATACCTTCTTCTCTTTGGAGTCTCAAAGATATCTTAGAGGTGAATTTTTCCTCTAATAATTTCATTGGTAATCTTCCACTTGAGATTGGGAATTTAAGAGCAATTGTATTATTAGATCTATCAAGAAATTATTTTTCAAGCAACATTCCTACAACAATCAGTTTCTTGAAAACATTACAGACTCTCTCTTTAGCACATAACAAACTGTATGGATCAATTCCAACATCATTTGATGATATGGCAAGTTTGATATCTTTGGATTTGTCTCAAAATTTGTTAACTGGTGTTATTCCAAAATCCTTAGCATCACTTCGTTATCTTCAATACATCAACTTCTCATATAATAGTTTACAAGGAGAGATTCCTGATGGTGGACAGTTCAAAACATTCACAGCTCAATCTTTCATGAATAATGAAGCGCTTTGCGGCGATCCTCGCCTACATGTACCTCCTTGTGTTAAACAAGTTAAGAAAAGGTCAACTACAAAGAAGCTATTAATCAAAATCCTATTGCCTTTAATTGTGTTTGTGTCGACTATTTTAGTTGTTGGTTGCATAATACTTGTAAAACATAAAAGGAAAAAGGTTGAAAATAATGTTGAAAGGGGTTTATCAACTTTAGGAGCTCCAAGAAGAATATCCTATTATGAACTTGTGAAAGCAACTAATGGGCTCAATGAGAGTAATTTACTTGGAAGAGGGAGCTTTGGCTCAGTGTATCAGGGGAAGCTTCCTGATGGACAGATGATTGCAGTTAAAGTAATTGATTTACACTCGGAGGCGAAATCAAGGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATTTGGTTAAGATTATCAGTAGTTGTTCAAATCTTGATTTCAAAGCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTGGACAAATGGTTATATTCAGATAACTATTGTTTAAATTTCTTGCAAAGGTTAAATATAATGATAGATGTTGCATATGCTTTGGAATATCTCCATCATGGTTCTTCAGTACAAGTGGTTCATTGTGATCTAAAGCCTACTAATGTGTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCCAAGCTCTTAGATGAAGGACAGTCTAAGACTCATACACAAACTTTGGCTACTCTTGGATACCTTGCACCAGAGTATGGATCTAAGGGAATAGTTTCTATGAAAGGAGATGTGTACAGCTATGGGATTATGCTGATGGAAATCTTCACAAGAAGAAAGCCAACGGATGATATGTTTGTTGGAGAACTAAGTTTGAAAACATGGATCAGTGAATCATTGCCTAATTCAATAATGGAGGTTGTGGATTCTAATTTAGTCCAACAAAATGGTGAACAAGTTGATGACATATTGACTTATATGTCATCTATCTTTGGTTTAGCCTTGAATTGTTGTCAATATTCACCCGAGGCAAGAATTAATATGACAGATGTTATTTCGTCACTAACCAAAATCAAAACCTTGGTTCTTGGCGCAAGTGAGGTCTAG 3624 0.3463 MMNPFTSLFLFSLSVHCFVACLASNTKNITTDEFSLLAFKSLITLDPFNILSNNWSTSSSLCNWVGVTCDEKHNRVHTLNLKNMGLRGTISPNLGNLSFLVILDLSGNSLQGQIPKEIFLLRRLKVLDISYNEFVGEIPTELGDLTELQNLYLGINNFSGLIPQSIHKLSKLEQFDCAINLFQGSIPLVIGQLSRLEVLDLSYNMLSGHIPQSITNLTSLQEMYLSSNYFSGEIPKGILGDLSQLRTMELDNNQLSGNISSILKFNNSLLQDFNLGYNNLSGNLPSNICQGLPNLRYLNLYYNELSGDMPTIWHQCEVLDELELSYNSFNKGPMPLGIRNMTKLRYLHLCGNNLEGNIPSLYNMTSLRVVRFDENYLNGSLPNDFFNQLPKLENFTLYSNQFQGSIPQSIGNCSSLIFLGLAGNFFTGSLPKEIGYVDQLKFLILANNSFSGSIPSKLFNMSKLTYLHLEQNYFSGIIPSNKGYTLPSLQQLHLSLNNFVGNIPINICNASNLIQFQVSYNSFSGTLPNAFGNLRFLEGFLINDNDLIIHDSLQLFTSLTNSRYLKYLDVSRNHIHSNLPKSIGNLTLVSFGADSCGIDGNIPLEIGNMTNLLSLNLNGNNLNGSIPRTFKELHKLQVLDLGYNGLQGSFIEELCEIESLSELNLENNKLSGVLPKCMVKMTSLRKLHIGSNSLNSRIPSSLWSLKDILEVNFSSNNFIGNLPLEIGNLRAIVLLDLSRNYFSSNIPTTISFLKTLQTLSLAHNKLYGSIPTSFDDMASLISLDLSQNLLTGVIPKSLASLRYLQYINFSYNSLQGEIPDGGQFKTFTAQSFMNNEALCGDPRLHVPPCVKQVKKRSTTKKLLIKILLPLIVFVSTILVVGCIILVKHKRKKVENNVERGLSTLGAPRRISYYELVKATNGLNESNLLGRGSFGSVYQGKLPDGQMIAVKVIDLHSEAKSRSFDAECNAMRNLRHRNLVKIISSCSNLDFKALVMEFMSNGSVDKWLYSDNYCLNFLQRLNIMIDVAYALEYLHHGSSVQVVHCDLKPTNVLLDENMVAHVSDFGIAKLLDEGQSKTHTQTLATLGYLAPEYGSKGIVSMKGDVYSYGIMLMEIFTRRKPTDDMFVGELSLKTWISESLPNSIMEVVDSNLVQQNGEQVDDILTYMSSIFGLALNCCQYSPEARINMTDVISSLTKIKTLVLGASEV 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02064 1207 ProSitePatterns Protein kinases ATP-binding region signature. 928 950 IPR017441 GO:0005524
Car07g02064 1207 ProSiteProfiles Protein kinase domain profile. 922 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02064 1207 SMART LRR_typ_2 681 705 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 753 776 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 97 121 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 145 168 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 609 632 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 292 315 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 193 216 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 389 413 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 437 461 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 559 586 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 777 800 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 217 241 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 657 680 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 486 510 IPR003591 -
Car07g02064 1207 SMART LRR_typ_2 364 388 IPR003591 -
Car07g02064 1207 SUPERFAMILY L domain-like 42 378 - -
Car07g02064 1207 Gene3D Ribonuclease Inhibitor 240 556 IPR032675 -
Car07g02064 1207 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 196 329 - -
Car07g02064 1207 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 400 1202 - -
Car07g02064 1207 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 148 - -
Car07g02064 1207 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 295 429 - -
Car07g02064 1207 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 145 287 - -
Car07g02064 1207 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 145 287 - -
Car07g02064 1207 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 10 148 - -
Car07g02064 1207 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 295 429 - -
Car07g02064 1207 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 400 1202 - -
Car07g02064 1207 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 196 329 - -
Car07g02064 1207 Gene3D Ribonuclease Inhibitor 557 850 IPR032675 -
Car07g02064 1207 Gene3D Phosphorylase Kinase; domain 1 905 997 - -
Car07g02064 1207 SMART LRR_sd22_2 753 779 - -
Car07g02064 1207 SMART LRR_sd22_2 633 656 - -
Car07g02064 1207 SMART LRR_sd22_2 559 588 - -
Car07g02064 1207 SMART LRR_sd22_2 193 219 - -
Car07g02064 1207 Pfam Protein kinase domain 924 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02064 1207 Gene3D Ribonuclease Inhibitor 185 239 IPR032675 -
Car07g02064 1207 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Car07g02064 1207 Gene3D Transferase(Phosphotransferase) domain 1 998 1202 - -
Car07g02064 1207 SUPERFAMILY Protein kinase-like (PK-like) 903 1194 IPR011009 -
Car07g02064 1207 Pfam Leucine rich repeat 755 814 IPR001611 GO:0005515
Car07g02064 1207 Pfam Leucine rich repeat 191 229 IPR001611 GO:0005515
Car07g02064 1207 SUPERFAMILY RNI-like 445 820 - -
Car07g02064 1207 SMART serkin_6 922 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02064 1207 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1041 1053 IPR008271 GO:0004672|GO:0006468
Car07g02064 1207 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02064 Car-Chr7 25050616 25060446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02064 31 688 Receptor kinase-like Gene Family AT3G47570 32.489 8.63e-76 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Car07g02064 Pkinase 9.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02064 - K13420 gmx:100784397 1192.95