Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02049 ATGGATCCGGGTGCGATGATGAACGAGGGTTCATTTCCGAATGGGAGTGGGAATACGACGCCGTTTAGTTTAGCGGAGATCTGGCAGTTTCCTGCGGCGATTAATGGCGGCGGAGGGGGATTAGGACTAAGAAGGCCGCAGTTTGGAAACAGTTTGGGACAGTTTGGTGAATTTGGACCCGGTTCGAACCGGGATGTTAATGGACCGGACCAGAGAGTTGTTTTGAACCATGGTGTTGGGGTTAGTGGTTGTAAGAAGAGGCGTGACTCGGAAGATGATTCTCCTAAGTGTGTTTCCACCAGTAATGGCGGTGCCAATGTCATGAATGATGGTGATGGAAAACGGTCTAAAGCATTAGGAAACAGAAATGAAGGTGGTGATGGTAAAGTTGAAGGAGAAGCCAGTTCAGGAAAGCCTGCGGAGCAAAACAATAAGCCACCTCCTCCTGACCCTCCTAAGCAAGATTACATCCACGTGCGAGCTAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCCGAACGCGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAGGATTTAGTTCCTGGTTGTAATAAGGTTATTGGGAAAGCATTAGTCCTTGATGAGATAATTAATTATATCCAATCACTTCAGCGCCAAGTAGAGTTTTTGTCGATGAAACTTGAAGCGGTTAATTCAAGACTGAACACCAGCATCGAAGCCTTTCCACCAAAAGATTTTGGTCAACAAACATTTGATCTAGCCGGCATGCCATTTGTGTCACAAGCTACAAGAGAGCCAAGCAGAGGTTCTTCTCCAGAATGGTTACATATGCAGGTAGGTGGTGGTTTTGAAAGAACAACGTAG 861 0.4611 MDPGAMMNEGSFPNGSGNTTPFSLAEIWQFPAAINGGGGGLGLRRPQFGNSLGQFGEFGPGSNRDVNGPDQRVVLNHGVGVSGCKKRRDSEDDSPKCVSTSNGGANVMNDGDGKRSKALGNRNEGGDGKVEGEASSGKPAEQNNKPPPPDPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTSIEAFPPKDFGQQTFDLAGMPFVSQATREPSRGSSPEWLHMQVGGGFERTT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02049 286 MobiDBLite consensus disorder prediction 1 20 - -
Car07g02049 286 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 233 IPR036638 GO:0046983
Car07g02049 286 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 215 IPR011598 GO:0046983
Car07g02049 286 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 286 IPR024097 GO:0006355
Car07g02049 286 CDD bHLH_AtBPE_like 156 240 - -
Car07g02049 286 Pfam Helix-loop-helix DNA-binding domain 169 216 IPR011598 GO:0046983
Car07g02049 286 PANTHER BNAC05G07950D PROTEIN 1 286 - -
Car07g02049 286 MobiDBLite consensus disorder prediction 261 286 - -
Car07g02049 286 MobiDBLite consensus disorder prediction 115 131 - -
Car07g02049 286 Gene3D - 162 239 IPR036638 GO:0046983
Car07g02049 286 Coils Coil 212 232 - -
Car07g02049 286 MobiDBLite consensus disorder prediction 51 156 - -
Car07g02049 286 SMART finulus 171 221 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02049 Car-Chr7 24703536 24707348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02049 1 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 52.027 4.14e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car07g02049 HLH 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02049 - - gmx:100784478 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02049 07 24703536 24707348 Car07g02049 07 24703536 24707348 ECH
Car02g00669 02 8624155 8627652 Car07g02049 07 24703536 24707348 PCT