Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02043 ATGACGTCATCATCATCCGGTAGAGCATTCCGTCTTCGTTGGGATGTATTCTTAAGTTTCAGAGGAGAAGACACACGCGAATGTTTCACGAAAAAACTGCATGAATCACTCAAAAGCCAAGGTATTCGTGCTTTCATGGACGACGAAGGTTTACAGCGTGGGGACCACATAGCACTCAGACTTATTGAAGCCATTGATGATTCTGCTGCTTCCATTGTTATTATCTCTCCTAACTACGCAGATTCTGATTGGTGCCTTAAAGAACTTGCTAAGATTTTCGAGCGTGGGAGACTTGTTATTCCTGTTTTCTACAAGGTTGATCCGTCTCATGTTAGGAAACAATCGGGTCCTTTTGAAGAAGGTTTTAGGATTCTTGAAAAGCGGTTTGGGAATCAGGAAGGGAAGGTTTGGAGAGAAGCTATGTCTAAACTTGGTGGAATTGCTGGTTTGCTTTATGATGATAGTAATGGTGATGGAGAGCATGATAATTTGATACGCCTTTTGGTGCAAAGGGTTTTGAAGGAGTTAAGCAATACTCCAATGAATGTATCTGAGTATGCAGTGGGGATCAATGAACGTGTTGAGAAGGTGATGGATCTGTTAAAAGATCAATCCAACAATGTCAATGTTTTGGGATTGTATGGTATGGGTGGTGTTGGTAAGACTACACTTGCAAAGGCTCTTTTCAATAGTCTTGTTGGTCGTTTCGAGCGTCGATGTTTCCTTTCAAATGTGAGACAATTTTCATCTAAAGAGGATGGTTTGGTTTCTCTTCAAAGCAATATCATTAAAGATCTTTCTCATGAAAAAAGGACTCATCAGAGTCCTATCATTGATGTTAATGCTGGTATTTCTGCTATCAAAAGAATAGTTAACGAAAATCGAGTTCTTCTAGTGTTGGATGATGTTGATGATGTAAATCAGCTTGATGCTTTGATTGGTAAAAAGGAATGGTTTTATAAAGGAAGTTGTATAATAATCACCACAAGAGATACAACTGTTTTGCCTAAGAGGCATGTCAATGATTTATATGAAGTTACAGAACTGTATCCTGAACAAGCTTTAGAGTTATTCAGTCACCATGCATTCAGTAAAAAGGAGCCACCACCAAATTTTCTGAATCTGTCAAAGCAAATTGTGTCTCTTACAGGGAAAATGCCATTGGCTTTAGAAGTGTTCGGTTGCTTTCTGTTTGGTAAAAGGAGGGTGGAGGAATGGGAGGATGCTGTTGAGAAGCTGAAAAGAATCCAGCCAGAGAATCTTCATGATGTGTTGAAGATAAGTTATGATGGGTTGGATGAACAAGAGAAGTGTATATTCCTTGATATTGCCTGTTTCTTTATTCAAACAAAGCGCGGTGATGTGATTGATGTGTTGAGAGGTTGTGGATTTAGAGGAGAGATAGCTATGACAATCCTTGAAGAAAAATGCTTAATCAAAATAAGGGAAGACAGTACTCTTTGGATGCATGATCAAATTAGGGATATGGGAAGACAGATTGTTCTAGATGAAAACCATGTTGATCTTGGGATGCGTAGTAGATTGTGGGATCGTGTTGAAATCATGTCTGTTTTGAAGAGTAAGAAGGGAACAAGATGCATACAAGGAATTGTACTAGACTTTAAGGAAAGATCAAAAAAGTTGACTACTACAAGTTATTCTCATCCTCATGCAGAGAAGTACAATGAGGTAGTACTTAATGCCAAATCATTTGAACCAATGGTTAACTTGAGATTGCTCCAGATCAATAATCTGAGTTTGGAAGGCAAGTATCTTCCAAATGAACTGAAGTGGCTACAATGGCGAGGATGTCCTTTAGAATCTATGCCTCTGGACACTTTGCCCCGAGAACTGACTGTCCTTGATCTCTCAAATGGCCAGAAAATTAAAAGCTTGTGTCGATCAAAAAGTCACACGGTACCAGAGAACCTAATGGTCATGAACCTCTCCAACTGCATCCAACTTGCTACAATTCCTGATTTATCTTGGTGTCTCCAGATAGAGAAGATAAATTTGGAAAACTGCATTAATCTAACAAGGATTCACGAATCAATTGGAAGTTTGACTACCTTGCGTAATCTGAATATGACGCGTTGTAGAAACATTGTTGAACTTCCCAGTGATGTCTCGGGTCTGAAACATCTAGAGAGCCTCATTCTTTCTAGTTGCTCCAAGTTGAAAGCATTACCTGAAAACATAGGCATACTTAAATCTCTGAAAGTACTTGCTGCTGATGACACAACTATAGTAGAGCTTCCCCAATCTATTTTTCGCCTGACCAAACTCGAATCGCTTGTTTTAGACCGTTGCAAATATTTGAGAAGACTACCAGAATGCATTGGAAATCTATGTTCTTTGCAAGAATTATCTCTTAATCAGTCAGGTTTACAAGAATTACCCAACACTATTGGATCCTTGAAAAACCTTGAGAAATTAAGTTTGATTTGGTGTGAATCTCTCACTCAAATGCCTGATTCCATAGGAAATCTCGTATCGTTGACAGAACTTTTGGCTTACCACAGTGGAATTACAGAACTCCCTGCCACCATTGGTTCACTATCCTATATGAGCAAGTTATCAGTTGGAAAATGTAAACTTGTCAATAAATTGCCTGACTCAATTAAAACTCTAGTTTCAATTATCGAACTCGAGTTAGACGGAACATCTATCAGATATCTACCAGATCAAATTGGAGAGATGAAACAACTTAGGAAACTTGAGATTGGAAATTGTAGTTATCTTGAATCTTTGCCGGAATCGATTGGCCACCTAGGATCTCTTACTACACTGAACATAGTCAATGGAATTATCAAGGAATTGCCAGCATCGATTGGATTACTAGACAATCTTGTTACCTTAAAATTAAGCAGATGTAGAATGCTCAGACATCTTCCAGCTTCTATAGGAAACCTGAAATCTCTATATCACTTAATGATGGAAGAAACAGCTATACTAGACTTGCCTGAAAGTTTCGGTATGCTTTCAAGCTTGAGAACACTAAGAATGTCAAAGAAGCCTGATTTAGTTTCCACATTATCTGTGGAGAATATTGGTTATTTTGTGATACCATCTTCTTTCTGTAATCTGACCTTGCTACATGAGCTGGATGCGCGTGCCTGGAGATTATCCGGGAAAATTCCGGATGATTTTGAGAAGTTATCATTGTTAGAGACTTTAAATTTGGGCCAAAACAATTTTCACAGCCTTCCTTCCAGCTTGAAAGGCCTTTCCGTTCTCAAGAATCTCTCACTGCCAAATTGTACGGAACTGATTTCTCTCCCCTCGCTTCCTTCGAGCTTGATTGAGCTGAATGCTGATAATTGTTATGCACTACAAACTATACATGACATGTCAAATTTAGAGAGTTTAGAGGAGTTGAAACTCACAAATTGTGAGAAAGTGGTGGATATTCCAGGTCTTGAATGCTTGAAATCGTTGAGAAGGTTGTACCTAAGTGGTTGCAAAGCATGTTCCTCCAATGCATACCGAAGGCTTTCGAAGGTTGCATTGAGAAATTTTCAGAACTTGAGCATGCCAGGAACCAAGTTACCAGAATTGTTTTCAGGAGAAACTGTAAGCTTTACCAAGCGCAAAAATCTTGAGCTAACAAGTGTAGTTGTAGGTGTTATTTTTTCAATTAACCATAACAAAATGGAAATTCAAATGCCTGGGGTGGTTGATGTTCAAGCAAAAGTTCTCAAACTAGGCAAACTTATCTACAGTTCAGTGCTATACATAGGAGGAGTGCCAAGGACAGATGAAAAACACATACACTTGCGAAGGTTCCAAGATTACCATCCATTGGTATCCATTTTAAAAGATGCTGATACAGTTAGTGTGGCAAAGAGAAGTCCTTCTTTTGATGAGAGGTTAGAGTTGAAAAAATGTGGAATACATTTAATCTATGAAGGGGATGATGATTATGTGGGAGATGAAGAATCGTTGGACAAAGGCCTACAATCTGTCTCAGAAAGGTTGGCTAGGTTTTTCAACACTAGTGAATGTGTTAATGACACTCAGAGTGAAGATGATTGTCAACATGAACTGGAGCAAGAAAAAGAGCATGGAACTAGATTACTTCCTGTTAAAGGCAATTTCATTCTTCTCATCCTGCTTAATATATTCTTTGTGCTGTTGAGTTGGTTTTGGTTGAGGTATTTGTCAAGTGCTGAACGAAGAGATTGA 4185 0.3869 MTSSSSGRAFRLRWDVFLSFRGEDTRECFTKKLHESLKSQGIRAFMDDEGLQRGDHIALRLIEAIDDSAASIVIISPNYADSDWCLKELAKIFERGRLVIPVFYKVDPSHVRKQSGPFEEGFRILEKRFGNQEGKVWREAMSKLGGIAGLLYDDSNGDGEHDNLIRLLVQRVLKELSNTPMNVSEYAVGINERVEKVMDLLKDQSNNVNVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFLSNVRQFSSKEDGLVSLQSNIIKDLSHEKRTHQSPIIDVNAGISAIKRIVNENRVLLVLDDVDDVNQLDALIGKKEWFYKGSCIIITTRDTTVLPKRHVNDLYEVTELYPEQALELFSHHAFSKKEPPPNFLNLSKQIVSLTGKMPLALEVFGCFLFGKRRVEEWEDAVEKLKRIQPENLHDVLKISYDGLDEQEKCIFLDIACFFIQTKRGDVIDVLRGCGFRGEIAMTILEEKCLIKIREDSTLWMHDQIRDMGRQIVLDENHVDLGMRSRLWDRVEIMSVLKSKKGTRCIQGIVLDFKERSKKLTTTSYSHPHAEKYNEVVLNAKSFEPMVNLRLLQINNLSLEGKYLPNELKWLQWRGCPLESMPLDTLPRELTVLDLSNGQKIKSLCRSKSHTVPENLMVMNLSNCIQLATIPDLSWCLQIEKINLENCINLTRIHESIGSLTTLRNLNMTRCRNIVELPSDVSGLKHLESLILSSCSKLKALPENIGILKSLKVLAADDTTIVELPQSIFRLTKLESLVLDRCKYLRRLPECIGNLCSLQELSLNQSGLQELPNTIGSLKNLEKLSLIWCESLTQMPDSIGNLVSLTELLAYHSGITELPATIGSLSYMSKLSVGKCKLVNKLPDSIKTLVSIIELELDGTSIRYLPDQIGEMKQLRKLEIGNCSYLESLPESIGHLGSLTTLNIVNGIIKELPASIGLLDNLVTLKLSRCRMLRHLPASIGNLKSLYHLMMEETAILDLPESFGMLSSLRTLRMSKKPDLVSTLSVENIGYFVIPSSFCNLTLLHELDARAWRLSGKIPDDFEKLSLLETLNLGQNNFHSLPSSLKGLSVLKNLSLPNCTELISLPSLPSSLIELNADNCYALQTIHDMSNLESLEELKLTNCEKVVDIPGLECLKSLRRLYLSGCKACSSNAYRRLSKVALRNFQNLSMPGTKLPELFSGETVSFTKRKNLELTSVVVGVIFSINHNKMEIQMPGVVDVQAKVLKLGKLIYSSVLYIGGVPRTDEKHIHLRRFQDYHPLVSILKDADTVSVAKRSPSFDERLELKKCGIHLIYEGDDDYVGDEESLDKGLQSVSERLARFFNTSECVNDTQSEDDCQHELEQEKEHGTRLLPVKGNFILLILLNIFFVLLSWFWLRYLSSAERRD 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02043 1394 Gene3D - 12 175 IPR035897 -
Car07g02043 1394 SMART LRR_CC_2 1143 1168 IPR006553 -
Car07g02043 1394 SMART LRR_CC_2 900 927 IPR006553 -
Car07g02043 1394 SMART LRR_CC_2 806 833 IPR006553 -
Car07g02043 1394 SMART LRR_CC_2 664 691 IPR006553 -
Car07g02043 1394 Gene3D - 349 433 IPR042197 -
Car07g02043 1394 PRINTS Disease resistance protein signature 210 225 - -
Car07g02043 1394 PRINTS Disease resistance protein signature 290 304 - -
Car07g02043 1394 PRINTS Disease resistance protein signature 383 397 - -
Car07g02043 1394 PRINTS Disease resistance protein signature 710 726 - -
Car07g02043 1394 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 149 IPR035897 -
Car07g02043 1394 SUPERFAMILY L domain-like 702 1006 - -
Car07g02043 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 443 IPR027417 -
Car07g02043 1394 SUPERFAMILY L domain-like 570 770 - -
Car07g02043 1394 Gene3D Ribonuclease Inhibitor 842 1012 IPR032675 -
Car07g02043 1394 Gene3D Ribonuclease Inhibitor 544 744 IPR032675 -
Car07g02043 1394 PANTHER TMV RESISTANCE PROTEIN N-LIKE 11 1292 - -
Car07g02043 1394 SMART LRR_typ_2 947 971 IPR003591 -
Car07g02043 1394 SMART LRR_typ_2 1053 1075 IPR003591 -
Car07g02043 1394 SMART LRR_typ_2 736 759 IPR003591 -
Car07g02043 1394 SMART LRR_typ_2 830 853 IPR003591 -
Car07g02043 1394 SMART LRR_typ_2 877 900 IPR003591 -
Car07g02043 1394 SMART LRR_typ_2 783 806 IPR003591 -
Car07g02043 1394 Gene3D Ribonuclease Inhibitor 745 841 IPR032675 -
Car07g02043 1394 Pfam NB-ARC domain 192 419 IPR002182 GO:0043531
Car07g02043 1394 SMART till_3 13 147 IPR000157 GO:0007165
Car07g02043 1394 Gene3D Ribonuclease Inhibitor 1013 1096 IPR032675 -
Car07g02043 1394 Gene3D Ribonuclease Inhibitor 1098 1188 IPR032675 -
Car07g02043 1394 Gene3D - 176 342 IPR027417 -
Car07g02043 1394 SUPERFAMILY "Winged helix" DNA-binding domain 421 526 IPR036390 -
Car07g02043 1394 SUPERFAMILY RNI-like 926 1177 - -
Car07g02043 1394 Pfam TIR domain 14 181 IPR000157 GO:0007165
Car07g02043 1394 ProSiteProfiles TIR domain profile. 12 180 IPR000157 GO:0007165
Car07g02043 1394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 1292 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02043 Car-Chr7 24562709 24570617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02043 14 859 WRKY Transcription Factor Family AT4G12020 29.527 2.11e-71 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02043 - - mtr:MTR_8g062130 2116.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02043 07 24562709 24570617 Car07g02043 07 24562709 24570617 ECH