Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car07g02029 | ATGAAGAGGTCTAGAGATGATGTTTACATGAGTTCACAACTCAAACGCCCCATGCTGTCTTCTAGAGAAGAACCCTCGAGGCAACCCCAGGTGATGAGTGATGGTCAGAAACTAACCACAAACGACGCCTTATCATATCTAAAGGCAGTAAGAGAAATGTTTCAAGATAACAAGGAAAAGTATGATGACTTTTTGGAAGTTATGAAGGATTTCAAGGCCCAAAGGTATGTTCATGGTGTACTTCATTCTCATTCTTTTGAGCTGTTCAAAGGCCATAAAGATTTAATTTTGGGATTTAACACCTTCTTGCCAAAGGGATATGCAATCACACTTCCATTGGAAGAAGATGAACAGCCTCCACAGAAGAAGCCCGTTGAATTTGAAGAAGCTATCAATTTTGTGGGCAAGATTAAGATTCGTTTTCAAGGCAATGATCGTGTTTACAAGACTTTTTTGGACATATTAAATATGTACAGAAAAGAAACCAAGAATATCAACCAGGTTTACCAAGAGGTTTCTGCCCTCTTCCAAGACCATGAGGATCTTCTTGAGGAGTTTACTCATTTTCTTCCTGATACTTCAGGAACAGCCTCTACTCACTTTGCTTCTGCTCGAAATTCTCTCCTTCGTGATAGGAGTTCTGCAATGACAACAGTGAGGCAAATGCATGTTGACAAGAGAGAAAGGACAACAGCTTTGCACGGTGACCGTGATCTCAGCGTTAATCATCCTGATCCAGAACTTGACAGAGGTTTGATGAGGCCTGATAAGgagcagagaagacgcgagagagaaaaggaccgtagagaagagagagacaggagagaacgggaaagggatgatagagaTTATGATAATAATGATGGTAGTCGAGAGCGTTTATCCCACAAGGGAAAATCTGGTCATAGAGCTATAGACCCTGGTACTGAGCCATTGCATGATGCAGATGAAAAGTTTGACATGCACCCTATCGCGTCCGCTTGCGAGGATAAAAGTTCTTTGAAAAGTATGTGTAGTCCAGTGCTTGCTTTCCTTGAAAAAGTCAAGGAGAAATTAAGCAATCCTGAGGATTACCAGGAATTTTTGAAGTGCCTACATATCTACAGCAGGGAAATAATCACCCGGCAAGAACTACTTGCATTGGTGGGCGATTTACTGGGAAAATATACTGATATTATGGATGGGTTTGATGATTTTGTGACACAATGTGAAAAGAATGGTAATGTTCAAGCTATTTTTTCAATTTCTACAAAATTTAAATCCTTGTGGAATGAAggacatggaccgaaaccagtgaaggtagaggacaaggacagggaccgtgacagggaTGATGGGGTGAAAGCAAGGGATCAAAGAGACAAATCCACTGGAATTGCCAATAAGGATGTTTCTATTCCTAAGGTGTCGTCTCTAAGCAAAGACAAGTATGTAGGAAAACCTATAAATGAGCTGGACCTTTCTAACTGTGAACAATGCACTCCCAGTTACCGTCTTCTACCAAAAAATTACCCAATACCGTTAGTTAGCCAGAGGACTGAACTTGGTGCCAAAGTATTGAATGATCACTGGGTTTCTGTCACATCAGGAAGTGAGGATTATTCCTTTAAACACATGCGCAAAAATCAGTATGAAGAGAGCTTGTTTAGATGCGAAGATGACAGGTTTGAACTTGATATGTTGTTAGAGTCTGTAAATATGACAAATCAGAGAGTTGAAGAGATCTTAGAAAAGATTAATGCTAATATAATTAAAGGAGACAGCCCAATTCGTATTGAGGAACACTTAACAGCCCTAAATCTTAGGTGCATTGAAAGATTGTATGGTGACCATGGGCTTGATGTGATGGATGTGTTGAAGAAGAATGCATCTTTAGCTTTGCCAGTCATATTAACCCGCTTGAAGCAGAAACAGGAAGAGTGGGCAAGATGTCGTGCTGATTTTAACAAAGTTTGGGCTGAAATATATGCAAAGAATTATCACAAATCACTTGATCACCGAAGCTTTTACTTTAAGCAGCAGGATACGAAAAACTTGAGCACTAAAGCCTTACTGGGAGAGATCAAAGAAATTAGCGAGAAGAAAAAAAAAGAAGACGATGTTCTTCTTGCAATTGCTGCTGGAAATAGACGGCCTATTATTCCTAACTTGGAATTTGAGTATCCTGATCAAGAAATTCACGAAGATTTGTATCAGCTCATCAAATATTCCTGTGGAGAAGTTTGTACAACTGAACAATTAGATAAAGTCATGAAGATTTGGACAACATTTTTAGAACCCATGTTTGGTGTTCCTTCTCGACTGTGTATTCCCGAAGATACAGAAGATGCTGTCAAGGCTAAGAATGATTCTGCAAAAATTGGCACTGCAAGTATTGCCGAGGATGATGGTAGTCCTGACGGTGGTGCTACCGTAATGAATCCTAATAATTCAAACACTACTAGTAATGGGGATGCCAGTGTTCCATTTGAACAGTCAAATGCTTGCAAAGAATGGCAAACAAATGGGATTGGTGGGGTTAAAGAGCATGATTGTCTCGAATTAGACCACTCTGCTCCTAAGACTGAAACTTTGGGAAGTTGTACACAGCAAGGTAAAATTCAGATAAGTGCATCCATTGCTGATGAAGTATCAAGAGTCAATAAGCAAGATCATTCCATTGAACAGTTGGTGAATGCTAATGTCTCACTGTCCTCTGGAATGGAGCAAAGTAATGGAAGAACAAACATGGATAATGCATCAGGACTTACTGCAACTCCGTCTAGACCTGCTCATGTTTCTGGTGAGGGAGGGCTTGATTTACCTTCATCAGAGGGTGCTGATTCTACAAGACCAGTTACATCCGCAAATGGGGCTACCACTGAAGACACCAAAGTTCACAGATGTCACAAAGAATCAGTTGGACACTTCAAAAGTGAAAGAGAAGAGGGTGAATTATCTCCTAATGGAGACTTTGAAGAGGATAACTTTGCAGTTTATGCAAATGCTGGTCTGGAGGCAGTGCATAAAAGAAAAGGTGGTAATACCAGTCAACAATACCAAAATAGTCATGGGGAACAAGTTTGTGGTGAAGCTGGAGGAGAAAATGATGCTGACAATCAAAGTGATGGAAGTCCTCATAGATCATCAGACAGTGAAAATGCGTCTGAAAATGGTGATGTTTCTGGTACAGAGTCTGCTGATGGTGAGGAATGTTCTCGGGAAGAACATGAAGAGGATGGGGATCATGAACATGGTAACAAGGCTGAGAGTGAAGGTGAAGCTGAAGGAATGACTGATGCCAATGATGTTGAAGGAGATGGATCCTCATTGCCATATTCAGAATGCTTTCTTCTCACTGTTAAGCCTCTGGTAAAACATGTTGGCCCAGTGCTGCATGGGAAAGAAAAGAACGTTCAAATTTTTTATGGAAATGACTCCTTTTATGTGCTATTTAGACTTCATCAGACATTGTATGAGAGAATACGATCAGCAAAGATTAACTCATCTTCTGCTGAAAAGAAATGGAGAGCTTCAAATGATACAAGTTCTACTGATCAATATGGCAGGTTCATGAATTCTCTTTACAGTTTACTGGATGGTTCTTCTGATAATTCAAAATTTGAGGACGATTGTCGAGCTATTATTGGAACTCAGTCATACGTCTTGTTCACGTTAGACAAACTGATATATAAACTTGTTAAACAGCTTCAAGCTGTTGCCAGTGCCACTGATGAGATGGATAACAAACTTCTTCAACTATATGCATACGAACAATCAAGAAAATCTGGAAGCTTTGTTGATGTAGTCTATCATGAAAATGCCCGTGTTCTTCTTCATGACGAGAACATATATCGCATTGAGTGTTCCCCTACTCGAATGTCTATTCAGTTGATGGACTATGGACACGATAAGCCTGAAGTGACTGCTGTGTCAATAGATCCTAATTTTGCAACCTATCTGTACAGTGATTTCCTATCTGTTGTCCCAGACAAAAAGGAGAAGTCAGGAATTTTGTTAAAAAGGAATAAAAATAAATATGCCTTGAGTGATGAAGTTTCAAACCAGGTCATGGATGGAGTACAAGTCATCAATGGTTTGGAGTGTAAGATTGCATGCAATTCATCCAAGGTTTCATACAGTACAGCGGTTCTGCAAATTATTTTCCATCAAATGATTGTATCCTATTTGAGCCACATATGTAATTTCGGTCATTCATCAGTGGCACCGACACCAGATGGCGCGATGACATGGCATCCAAGAAATGGAGAAAAATATGTTTTTCTGAGATGTAACTTTCTTGCGTCCTTCACATCTTCAACCCTTGCAACCAAATAA | 4317 | 0.3845 | MKRSRDDVYMSSQLKRPMLSSREEPSRQPQVMSDGQKLTTNDALSYLKAVREMFQDNKEKYDDFLEVMKDFKAQRYVHGVLHSHSFELFKGHKDLILGFNTFLPKGYAITLPLEEDEQPPQKKPVEFEEAINFVGKIKIRFQGNDRVYKTFLDILNMYRKETKNINQVYQEVSALFQDHEDLLEEFTHFLPDTSGTASTHFASARNSLLRDRSSAMTTVRQMHVDKRERTTALHGDRDLSVNHPDPELDRGLMRPDKEQRRREREKDRREERDRRERERDDRDYDNNDGSRERLSHKGKSGHRAIDPGTEPLHDADEKFDMHPIASACEDKSSLKSMCSPVLAFLEKVKEKLSNPEDYQEFLKCLHIYSREIITRQELLALVGDLLGKYTDIMDGFDDFVTQCEKNGNVQAIFSISTKFKSLWNEGHGPKPVKVEDKDRDRDRDDGVKARDQRDKSTGIANKDVSIPKVSSLSKDKYVGKPINELDLSNCEQCTPSYRLLPKNYPIPLVSQRTELGAKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNMTNQRVEEILEKINANIIKGDSPIRIEEHLTALNLRCIERLYGDHGLDVMDVLKKNASLALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKALLGEIKEISEKKKKEDDVLLAIAAGNRRPIIPNLEFEYPDQEIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEPMFGVPSRLCIPEDTEDAVKAKNDSAKIGTASIAEDDGSPDGGATVMNPNNSNTTSNGDASVPFEQSNACKEWQTNGIGGVKEHDCLELDHSAPKTETLGSCTQQGKIQISASIADEVSRVNKQDHSIEQLVNANVSLSSGMEQSNGRTNMDNASGLTATPSRPAHVSGEGGLDLPSSEGADSTRPVTSANGATTEDTKVHRCHKESVGHFKSEREEGELSPNGDFEEDNFAVYANAGLEAVHKRKGGNTSQQYQNSHGEQVCGEAGGENDADNQSDGSPHRSSDSENASENGDVSGTESADGEECSREEHEEDGDHEHGNKAESEGEAEGMTDANDVEGDGSSLPYSECFLLTVKPLVKHVGPVLHGKEKNVQIFYGNDSFYVLFRLHQTLYERIRSAKINSSSAEKKWRASNDTSSTDQYGRFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQAVASATDEMDNKLLQLYAYEQSRKSGSFVDVVYHENARVLLHDENIYRIECSPTRMSIQLMDYGHDKPEVTAVSIDPNFATYLYSDFLSVVPDKKEKSGILLKRNKNKYALSDEVSNQVMDGVQVINGLECKIACNSSKVSYSTAVLQIIFHQMIVSYLSHICNFGHSSVAPTPDGAMTWHPRNGEKYVFLRCNFLASFTSSTLATK | 1438 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car07g02029 | 1438 | SUPERFAMILY | PAH2 domain | 339 | 403 | IPR036600 | GO:0006355 | |
| Car07g02029 | 1438 | MobiDBLite | consensus disorder prediction | 956 | 979 | - | - | |
| Car07g02029 | 1438 | SUPERFAMILY | PAH2 domain | 36 | 107 | IPR036600 | GO:0006355 | |
| Car07g02029 | 1438 | MobiDBLite | consensus disorder prediction | 212 | 316 | - | - | |
| Car07g02029 | 1438 | Gene3D | Paired amphipathic helix | 42 | 104 | IPR036600 | GO:0006355 | |
| Car07g02029 | 1438 | PANTHER | PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2 ISOFORM X1 | 1 | 1383 | - | - | |
| Car07g02029 | 1438 | MobiDBLite | consensus disorder prediction | 426 | 460 | - | - | |
| Car07g02029 | 1438 | Pfam | Sin3 family co-repressor | 491 | 582 | IPR013194 | - | |
| Car07g02029 | 1438 | MobiDBLite | consensus disorder prediction | 429 | 458 | - | - | |
| Car07g02029 | 1438 | Coils | Coil | 562 | 582 | - | - |
Showing 1 to 10 of 34 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car07g02029 | K11644 | - | gmx:100781798 | 2006.88 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car07g02029 | 07 | 24185888 | 24198128 | Car07g02029 | 07 | 24185888 | 24198128 | ECH | |
| Car02g00651 | 02 | 8332197 | 8343993 | Car07g02029 | 07 | 24185888 | 24198128 | PCT |
Showing 1 to 2 of 2 entries