Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02027 ATGGCTTTGAATATGATATTTCTTTTGTGTCTTTTTTTTCTTTTTCATATTTTTTCAATACCAACATGTTATTGCCAAAACAATTCTAATTCTCTTCAAAACATAGAAACTTTCTATCCAAATGAAACTTCACCTTCTtcaccaacaaatcaattaccaccaccatcaccttcaccaacaccTCAAGGATCAATTGATGTATCAAAAAGTAGTTCATCAAATGCTAAGATAGCAAAAGCTGTGGCTGCAACAGCAGCAAGCACTATAGTTATTTGTGGTTTAATTTTCATTTTAGTTAAAAGGTTCTTAAGGAAAAGAAAGAGAAAATTAGAGACAAATAACAATACTTTTGATGGAGATAGACAAGTTGTTGTGGCAAAAGGGAATGTTTTTGAAAGAATTGATGGAAATGTGAGAGGTTTGATTGTTGATGAAGATGGTTTGGATGTTATTTATTGGAGAAAACTTGAAGGGAAGAACTCAAACAAGGATCTTCATAAAGAGGTATTGAATAGTCCTAAAAATAAAGAGGAATTGGAAGATGAAAATTCAGTGAAAAAATCTAAGTCCATTCAAGAAATTCCACTTCTTAGAGGGGAATCTTCAGCCTCTTGCATGAATATATTTCAAGAAGAGGATGAGCCTTATAGAATTGCAAGAATCCATCCTTCTACTAGTTTTCGTGACGGAGTCGATATAACAGGTGTTCAGATGAAAAGTCTGGTTGACAAACCAGATTTTTCATCTGAACCATCCGCTCTACCATCAATACAACCGACTGTTTCTTTTTCCGCGGTTGCAGCACCACCTGCCCCTCCTCCAATTCCAGCTAAGAAGAGTCCAGCAGCACCACCACCTCCTCCTCCTCAAATGAAGACAAGGGCTTTGAATTCATCAACAAAACATATCTCCAACAGCAATCAGAGAAACTCTTCAGGGAAAGGCATGCAAGAATCAAACAGTGATCAATTGAAGTTGAAGCCTTTACATTGGGATAAAGTGAATACTAATGCTGATCATTCGATGGTTTGGGACAAAGTCGATCGCGGATCATTCAGGGTTGATCAAGATCTTATGGAAGCTCTCTTTGGTTACGTCGCAACGAACCGAAGGTCGCCTAAAGGAAAGAGTGAATCAACAAGTCCAAGCAATGATGCCTCAACAAAAACATTCCTTCTTGACTCTAGAAAATCACAGAACATTGCTATTATTTTGAAATCTATAGCCGTCTCACGAGACGAAATCATCGATGCACTCATGGATGGAAAAGGCCTCAATGCAGAAACACTTGAAAAGCTTTCAAGAGTTTCTCCAACAGAAGAAGAGAAATCACTTATCCTTCAATATAGAGAAGATCCATCAAAACTTGCTGCAGCAGAATCATTCCTATATCACATCCTTAAAGCCGTTCCTTCGGCATTTGATCGCTTCAATGCAATGCTATTCAGATTGAACTATAACTTAGAAATTATGGAAATCAAAGATTATCTTAACACAATTGAATTAGGGTGTAAAGAGCTTAGAACTCAAGGACTTTTTTTGAAACTTCTTGAAGCAGTGCTTAAAGCAGGTAATAGAATGAATGCAGGAACTGTTAGAGGTAATGCTCAAGCTTTTAACTTGAATTCTCTTAGGAAACTCAATGATGTCAAAAGCAACAATGGAAAAACAACATTGCTACACTTTGTAGTTGATGAAGTAGTCCATTCAGAAGGAAAACGCGCGGTTCTTAACCGCAGCGGAAGCCTAAACCGAAATAACAGTAGGAGCAGAAGCAACAACATTGACACAAATTTTGTTTCTGATGAACTAAGAGAAAGGGAATATACAATGCTAGGGTTATCAATTGTGGGAGGAATAAGTTCTGAATTCTACAATGTTAAAAAAGCGGCGAATTTCGATTATAAAAGTTTAGTTGGTTCAATTTCAGCACTGTCAAATAGGCTAGTTGAAATTGAAGAACTTGTTAACCAATGTGGGAATGGTGAAAGAGGGTATTTTGGAAAAGAAATGAAAAGTTTTATTGGAAATGCTGAGGAGGAATTGAAACTAGTGAGGGAAAAACAAACAAGTGTGCTGCAAGTTCTTAGTAAAACAACTCAATATTATGAAAGTGGTGGAGATTCAAAAGTAAATGCTGAAAATAGTGTTGAATTGTTTGTCATTGTTAAGGATTTTTTGGGAATGGTTGATCGAGTTTGTATTGAAATTGCACGTGACATGCAGAAGAAGAATTCCAAAGGAACAAATAAGTCGTGA 2259 0.3568 MALNMIFLLCLFFLFHIFSIPTCYCQNNSNSLQNIETFYPNETSPSSPTNQLPPPSPSPTPQGSIDVSKSSSSNAKIAKAVAATAASTIVICGLIFILVKRFLRKRKRKLETNNNTFDGDRQVVVAKGNVFERIDGNVRGLIVDEDGLDVIYWRKLEGKNSNKDLHKEVLNSPKNKEELEDENSVKKSKSIQEIPLLRGESSASCMNIFQEEDEPYRIARIHPSTSFRDGVDITGVQMKSLVDKPDFSSEPSALPSIQPTVSFSAVAAPPAPPPIPAKKSPAAPPPPPPQMKTRALNSSTKHISNSNQRNSSGKGMQESNSDQLKLKPLHWDKVNTNADHSMVWDKVDRGSFRVDQDLMEALFGYVATNRRSPKGKSESTSPSNDASTKTFLLDSRKSQNIAIILKSIAVSRDEIIDALMDGKGLNAETLEKLSRVSPTEEEKSLILQYREDPSKLAAAESFLYHILKAVPSAFDRFNAMLFRLNYNLEIMEIKDYLNTIELGCKELRTQGLFLKLLEAVLKAGNRMNAGTVRGNAQAFNLNSLRKLNDVKSNNGKTTLLHFVVDEVVHSEGKRAVLNRSGSLNRNNSRSRSNNIDTNFVSDELREREYTMLGLSIVGGISSEFYNVKKAANFDYKSLVGSISALSNRLVEIEELVNQCGNGERGYFGKEMKSFIGNAEEELKLVREKQTSVLQVLSKTTQYYESGGDSKVNAENSVELFVIVKDFLGMVDRVCIEIARDMQKKNSKGTNKS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02027 752 SUPERFAMILY Formin homology 2 domain (FH2 domain) 269 743 - -
Car07g02027 752 MobiDBLite consensus disorder prediction 36 69 - -
Car07g02027 752 MobiDBLite consensus disorder prediction 372 390 - -
Car07g02027 752 PANTHER FORMIN-RELATED 9 747 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car07g02027 752 MobiDBLite consensus disorder prediction 266 292 - -
Car07g02027 752 Pfam Formin Homology 2 Domain 320 730 IPR015425 -
Car07g02027 752 MobiDBLite consensus disorder prediction 265 322 - -
Car07g02027 752 SMART it6_source 316 745 IPR015425 -
Car07g02027 752 ProSiteProfiles Formin homology-2 (FH2) domain profile. 316 752 IPR015425 -
Car07g02027 752 MobiDBLite consensus disorder prediction 47 61 - -
Car07g02027 752 PANTHER FORMIN-LIKE PROTEIN 9 747 - -
Car07g02027 752 Gene3D Formin, FH2 domain 315 741 IPR042201 -
Car07g02027 752 MobiDBLite consensus disorder prediction 293 322 - -
Car07g02027 752 MobiDBLite consensus disorder prediction 370 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02027 Car-Chr7 24131426 24134511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02027 9 744 FH2 protein (formin) Gene Family AT1G70140 41.809 6.51e-179 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02027 - - vun:114178801 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02027 07 24131426 24134511 Car07g02027 07 24131426 24134511 ECH
Car02g00644 02 8263883 8267068 Car07g02027 07 24131426 24134511 PCT