Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02023 ATGAGGCCTACAGCCTTGCTTGGTGTTCTGAACAAGCAGTTTCTTGGAATCGCCGGTGATGCTGCGAATGCTGTTGCTAAGAAGCTGACACCGTCTGCTTCTCTTGTGTCGCGAAAACCAGCGTTTATAGATGCATTCCTGTACAAGATGAAAAAGAACCCTGAACTTTTGAAGAACAAGACCATTTGGTCACGGAGATCCACCATCTTGCCGGAATTTGTTGATTCCCAGGTCAAAATTTACAATGGGAAAACCACCATTCGTTGTAAGATCACTGAGGGAAAAGTGGGTCATAAGTTTGGAGAGTTTGCACTCACTAGGAAACGCAAAAGTAGAGACCAACCTAATGCCAAAGTTAAACAACTCAAGAAAAAGAAGTGA 381 0.4357 MRPTALLGVLNKQFLGIAGDAANAVAKKLTPSASLVSRKPAFIDAFLYKMKKNPELLKNKTIWSRRSTILPEFVDSQVKIYNGKTTIRCKITEGKVGHKFGEFALTRKRKSRDQPNAKVKQLKKKK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02023 126 MobiDBLite consensus disorder prediction 107 126 - -
Car07g02023 126 ProSitePatterns Ribosomal protein S19 signature. 82 106 IPR020934 GO:0003723
Car07g02023 126 Gene3D 30s Ribosomal Protein S19; Chain A 34 121 IPR023575 GO:0003735|GO:0005840|GO:0006412
Car07g02023 126 Hamap 30S ribosomal protein S19 [rpsS]. 25 118 IPR002222 GO:0003735|GO:0005840|GO:0006412
Car07g02023 126 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 26 121 IPR002222 GO:0003735|GO:0005840|GO:0006412
Car07g02023 126 PRINTS Ribosomal protein S19 family signature 62 81 IPR002222 GO:0003735|GO:0005840|GO:0006412
Car07g02023 126 PRINTS Ribosomal protein S19 family signature 82 94 IPR002222 GO:0003735|GO:0005840|GO:0006412
Car07g02023 126 PRINTS Ribosomal protein S19 family signature 94 109 IPR002222 GO:0003735|GO:0005840|GO:0006412
Car07g02023 126 SUPERFAMILY Ribosomal protein S19 38 111 IPR023575 GO:0003735|GO:0005840|GO:0006412
Car07g02023 126 Pfam Ribosomal protein S19 46 110 IPR002222 GO:0003735|GO:0005840|GO:0006412
Car07g02023 126 PANTHER 40S RIBOSOMAL PROTEIN S19, MITOCHONDRIAL 26 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02023 Car-Chr7 24037792 24041023 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02023 36 117 Cytoplasmic Ribosomal Protein Gene Family AT1G04270 28.571 4.01e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02023 K02965 - gmx:100782150 205.682