Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01997 ATGAACTGCTTGCCAGTGATGGGCAAGAATTCTTCGCCTCATATGATGAAGTCCATCATAGCTTTAATGCAATGGGGCTGTAAGAAATCCTTCTGCGAGGCATATATGCTTACAGTTTTGAGAGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTCTACAAAGGCTTTGGTTTTGGCCCCTATGAGGGAGCTAGCTCAACAGATTGAGAAGGTTATGCGAGCTCTTGGCGATTTCCTTGGTGTTAAGGTTCATGCTTGTCTTGGTGGGACAAGTGTTCGTGAGGATCAACGCATTCTCCCTGCTGTTTGTTTGTTATGA 324 0.4506 MNCLPVMGKNSSPHMMKSIIALMQWGCKKSFCEAYMLTVLRGLLQSSKEELFLSTKALVLAPMRELAQQIEKVMRALGDFLGVKVHACLGGTSVREDQRILPAVCLL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01997 107 Pfam DEAD/DEAH box helicase 33 99 IPR011545 GO:0003676|GO:0005524
Car07g01997 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 101 IPR027417 -
Car07g01997 107 Gene3D - 1 105 IPR027417 -
Car07g01997 107 PANTHER EUKARYOTIC INITIATION FACTOR 4A-8-LIKE 38 103 - -
Car07g01997 107 PANTHER RNA HELICASE 38 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01997 Car-Chr7 23434988 23435412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01997 38 103 Eukaryotic Initiation Factors Gene Family AT3G13920 72.727 2.17e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01997 K03257 - bvg:104902579 92.4337