Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01996 ATGGAAGCTAAGACTGGACTCTTTGCTGGGTCTAATAACAGCAATGAACTTCTGGTCATCCAAGAACACAACGAGCCTAAGGCAGTGAAGAACTTGGATGGGCAAGTTTGTGAGATATGTGGTGATTCTGTAGGGCTTACAGTAGATGGAGACTTATTTGTAGCTTGTGAAGAGTGTGGCTTCCCTGTTTGCAGGCCATGCTATGAGTATGAAAGAAGGGAAGGGACTCAAGTTTGCCCTCAATGCCATACAAGATACAAGCGTATCAAAGGAAGCCCTAGAGTGGAGGGAGATGAAGACGAAGAAGATGTGGATGATATCGAATACGAATTTAAAATGGAAGAGGAAAAGTACAAGCTTAAGCATGAAGAGAATATGAATAGTAGAGATCATGATGGTGAGAATCCTAAATCAATAGGAAAGGTCAATGGGGAACAGTCCTTATCGTCCCACGGTATTGGCGAAACTTGTGGTGCAAAATTATATAACAAGGAGAAAACAGATGAATGGAAGTTGCAGCAAGGAAATCTGTTAATTGAAACTGATGCCTCAGTTGATCCTGAAAAAGCAATGAAAGATGAAACTAGAATGCCACTTTCAAGAAAAGTAGCAATACCTTCAGGAAAACTCAGTCCTTATAGAATGATGGTTGCGGCTCGACTCATCCTTCTAATACTCTTCTTTCAATATAGAATCTTCCATCCAGTACCTGAAGCAATGGGACTTTGGTTCATATCTGTATCATGTGAAATCTGGCTAGCATTTTCATGGATAGTTGATCAGATTCCCAAATGGTTTCCCATTGATCGCGAGACATATCTCGATCGCCTTTCGATCAGGTTTGAACCAGAAAACAAGCCCAATATGCTTTCTCCAATAGATATCTTTGTAACTACAGCAGATCCAATCAAGGAACCTCCTCTTGTTACAGCCAACACTATTCTTTCAATTTTGGCACTAGATTATCCTGCACACAAAATCTCATGCTACGTTTCTGATGACGGCGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACTGCTGAATTCGCTCGAAAATGGGTACCTTTTTGTAAACAATTCTCTATAGAGCCTCGAGCACCCGAAAAGTACTTCTCCGATAAGATAGACTTTCTTAAGGATAAGATTCAGTCCACATATGTAAAAGAACGCCGTACTATGAAGAGAGAATATGAAGAATTCAAGGTGAGAATAAATGCACTTGTGGCTAAATCCATGAGAGTTCCCACAGAAGGTTGGAGTATGAAAGATGAGACACCATGGCCAGGAAACAATCCAAAAGATCATCCAAGTATGATACAAATCCTTCTTGGTCATAATGGAGGAGACCATGAAGGGAATGGACTTCCTTGTCTTGTCTACATATCTAGAGAGAAAAGGCCTGCATTTCAACATCACACCAAAGCCGGTGCATTGAATGCCTTGCTTCGCGTATCAGCAGTGCTCAGCAATGCTCCTTTTGTTCTCAACTTGGATTGCAATCATTATGCAAACAACAGCAAAGTTGTGAGAGAAGCCATGTGTTTCTTTATGGACATTCAACTTGGGAATAGCATTGCTTTTGTCCAGTTTCCGCTGAGATTTGATAGCCTTGATAAAAATGATCGTTATGCCAACAAAAACACTGTTTTATTTGATATTAATTTAAGGTGTCTAGATGGAATTCAAGGACCTGTTTATATTGGTTCAGGGTGTATATTCAGAAGGAAAGCTTTAAATGGCTTTGATTCTCCTAAGGCGTCTAAACGCCCTCGAAGTGTACAAGTGCATTCAAAACAGGATGAAAATGGAGAAGATGCAAGCATTATAGAAGCAACAGATGAAGATAAGCAGCTATTGCAATCAAATATGAATACTGAAAATAAATTTGGAAAATCTACACTCTTCATGAATTCTTCATTAACAGAAGAAGGTGGTGTAGATCCTTCTTCAAGTCAAGAAGCTCTTCTTAAAGAAGCCATTCATGTCATGAGTTGTAGCTATGAAGACAGAACACTCTGGGGTTATGAGGTGGGTATGAGCTATGGATCTATAGCAGCAGATATGCTAACAAGTTTGAAGATGCATTCGCGCGGTTGGAGATCTGTATACTGCATGCCAAAGAGAACTGCTTTTAGAGGCACAGCACCAATCAATCTTACAGAAAGACTTAATCAGGTTCTTAGATGGGCAGTAGGGTCACTTGAGATTCTGTTCAGCAGCCACTGCCCACTATGGTATGGTTTTAAGGAAGGAAAACTCAAGTTGCTCCAGAGGATTGCCTATATTAACAGCACTGTCTACCCTTTTAGTGCATTGCCTCTCCTAATCTATTGCATCATTCCTGCCATCTGCTTGCTCACTGATAAATTCATCACACCATCGGTAGGAACTTTTGCAAGTCTAGTATTCATTTCTCTCTTCATCTCAATCTTTGCATCTGCAATTCTTGAACTGAGATGGAGTGGAGTTAGTCTTGAGGAATGGTGGAGAAACCAACAATTCTGGGTCATTGGAAGTATCTCAGCACACCTCTTTGCAATTGTCCAAACTCTAATGGGAGGATTCCTTGGTAGATTTAATGCACACTTCAGCATTGTATCGAAGGCACCGGACGAAGACGGCGAGTTTCATGAACTATACACCATTAGATGGACAGTACTACTAATACCACCAACAACAGTAACAGTAATTAACCTTATTGGTATTGTGGCTGGTTTCACAGATGCTATAAATAGTGGTGAACATTCTTGGGGAGCATTGATTGGGAAACTATTCTTTTCTTCATGGGTTATTGCTCATCTTTATCCATTTCTTAAAGGACTAATGGGAAGACAGAACAGAACACCAACTCTTATTGTTATTTGGTCTGTGCTTTTGGCTTCTATTTTTTCTTTGGTTTGGGTGAGAATTGATCCTTTTGTGTTGAAAACTAAAGGGCCTGATGTTAAGCAATGTGGAATTAGTTGTTGA 2973 0.402 MEAKTGLFAGSNNSNELLVIQEHNEPKAVKNLDGQVCEICGDSVGLTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVEGDEDEEDVDDIEYEFKMEEEKYKLKHEENMNSRDHDGENPKSIGKVNGEQSLSSHGIGETCGAKLYNKEKTDEWKLQQGNLLIETDASVDPEKAMKDETRMPLSRKVAIPSGKLSPYRMMVAARLILLILFFQYRIFHPVPEAMGLWFISVSCEIWLAFSWIVDQIPKWFPIDRETYLDRLSIRFEPENKPNMLSPIDIFVTTADPIKEPPLVTANTILSILALDYPAHKISCYVSDDGASMLTFEALQETAEFARKWVPFCKQFSIEPRAPEKYFSDKIDFLKDKIQSTYVKERRTMKREYEEFKVRINALVAKSMRVPTEGWSMKDETPWPGNNPKDHPSMIQILLGHNGGDHEGNGLPCLVYISREKRPAFQHHTKAGALNALLRVSAVLSNAPFVLNLDCNHYANNSKVVREAMCFFMDIQLGNSIAFVQFPLRFDSLDKNDRYANKNTVLFDINLRCLDGIQGPVYIGSGCIFRRKALNGFDSPKASKRPRSVQVHSKQDENGEDASIIEATDEDKQLLQSNMNTENKFGKSTLFMNSSLTEEGGVDPSSSQEALLKEAIHVMSCSYEDRTLWGYEVGMSYGSIAADMLTSLKMHSRGWRSVYCMPKRTAFRGTAPINLTERLNQVLRWAVGSLEILFSSHCPLWYGFKEGKLKLLQRIAYINSTVYPFSALPLLIYCIIPAICLLTDKFITPSVGTFASLVFISLFISIFASAILELRWSGVSLEEWWRNQQFWVIGSISAHLFAIVQTLMGGFLGRFNAHFSIVSKAPDEDGEFHELYTIRWTVLLIPPTTVTVINLIGIVAGFTDAINSGEHSWGALIGKLFFSSWVIAHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRIDPFVLKTKGPDVKQCGISC 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01996 990 Coils Coil 391 411 - -
Car07g01996 990 Pfam Cellulose synthase 293 984 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car07g01996 990 PANTHER CELLULOSE SYNTHASE 1 990 - -
Car07g01996 990 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 990 - -
Car07g01996 990 SUPERFAMILY RING/U-box 22 105 - -
Car07g01996 990 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 451 586 IPR029044 -
Car07g01996 990 MobiDBLite consensus disorder prediction 584 607 - -
Car07g01996 990 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Car07g01996 990 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
Car07g01996 990 MobiDBLite consensus disorder prediction 122 138 - -
Car07g01996 990 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Car07g01996 990 SUPERFAMILY Nucleotide-diphospho-sugar transferases 306 793 IPR029044 -
Car07g01996 990 MobiDBLite consensus disorder prediction 122 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01996 Car-Chr7 23399884 23406510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01996 1 990 Cell Wall Biosynthesis AT5G17420 65.082 0.0 1374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01996 K10999 - gmx:100777270 1642.86