Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01994 ATGCCATTTGGTTTCGTCTCGGCTTGGAACAAGCGTCGACGAAGCAAGTCTCAAGATCATTCCGACCCTTGGATTTATAAGCCTGCAGAGTTTTGGCAACTTGAAGATCAAACACCACAAACTACTAAAAGGAGGCATGGATCATCTGTTTTCACACTCAAGGAGATGGAAGATGCAACATGTTCATTCAGTGATGATAATCTTGTTGGAAAAGGAGGATTTGGTAGGGTCTACAGGGGCATTTTGAAGTCAGGACAGGTTGTAGCAGTGAAGAAAATGGAACTACTGGGGATTAAAGAAGCCGAAGGGGAGCTCGAATTTCGGGTAGAAGTCGACATATTGAGCAGGCTAGACCACCCAAATCTTGTTTCTTTGATAGGGTATTGTGCTGATGGGAAGCATAGATTCTTAGTATATGAATATATGCATAATGGAAACCTGCAAGATCATTTGAATGGAATCAAGGTAAGAAGAATGGATTGGCCTCAAAGACTAAGAGTGGCATTAGGTGCTGCAAAAGGGCTTGCTTATCTCCATTCAAGTTCTTGTGTTGGAATCCCTATTGTTCATAGAGATTTCAAGTCCACCAATATTCTTTTAGATGTCAATTTTGAAGCAAAGATATCTGATTTTGGGCTTGCAAAGCTAATGCCAGAAGGAGAGGAGACACATGTAACTGCTAGAGTATTTGGTACCTTTGGCTATTTTGACCCTGAGTATACATCAACAGGGAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTGCTTCTTGAGCTTTTGACAGGACGTAGAGCAGTAGATCTAAACCAAGGTCCAAATGATCAAAACCTTGTACTACAAGTGAGACACTTACTAAACGACTGCAAGATGCTACGTAAGGTGATTGATCCAGATATGATTCGAAATTCTTACACCATTGAATCGATATTCATGTTTGCCAATCTGGCATCGCGATGCGTCCGTCCGGAGAGTAACGAGAGACCTTCAATGAAAGATTGTGTCAAAGAAATTCAAATTATTATTTGTACAAATACAAAAGGCTTGGGAATGGTTATGCATAGCTTGAGAATGTTATAG 1086 0.4052 MPFGFVSAWNKRRRSKSQDHSDPWIYKPAEFWQLEDQTPQTTKRRHGSSVFTLKEMEDATCSFSDDNLVGKGGFGRVYRGILKSGQVVAVKKMELLGIKEAEGELEFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIKVRRMDWPQRLRVALGAAKGLAYLHSSSCVGIPIVHRDFKSTNILLDVNFEAKISDFGLAKLMPEGEETHVTARVFGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHLLNDCKMLRKVIDPDMIRNSYTIESIFMFANLASRCVRPESNERPSMKDCVKEIQIIICTNTKGLGMVMHSLRML 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01994 361 Gene3D Phosphorylase Kinase; domain 1 29 141 - -
Car07g01994 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Car07g01994 361 Gene3D Transferase(Phosphotransferase) domain 1 142 350 - -
Car07g01994 361 SUPERFAMILY Protein kinase-like (PK-like) 40 345 IPR011009 -
Car07g01994 361 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01994 361 PANTHER OS01G0750732 PROTEIN 1 360 - -
Car07g01994 361 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 360 - -
Car07g01994 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01994 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Car07g01994 361 CDD STKc_IRAK 69 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01994 Car-Chr7 23364913 23368031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01994 46 340 Receptor kinase-like Gene Family AT3G58690 47.667 8.09e-91 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Car07g01994 Pkinase 8.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01994 - - gmx:100820613 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01994 07 23364913 23368031 Car07g01994 07 23364913 23368031 ECH