Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01977 ATGAAGTTGGACAGGATTGAAGAGAGCAGTAGCAGTGTGAGGTTGTTGGGGGGGAGAAGCAAGAGTAGTAGTGATGGTGCGAGTAGTGAATCTAGGTGGGTTGATGGAAGTGAAGTTGACTGGGATGAAGCTCCTCCATGGTCTAATAAGAATGATAATCATGGAAGTGATGGTGGAAGAGAAGGGTATGGTTCAAATTCAATTAGGAGGAGGTTAATTAAGAAACCTAAAAGGGTTGATTCTTTTGATGTTCAAGCTATGCAGATTGCTGCTAGTCATGATCAACACTCAAAGGACCTTTCCCTTTTGCCTACCATTGCATTGGCATTTCAAACTCTTGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTATATGTTTTTGCTGATGTCTTCAGCAAGGTTCCTATTGGATCAGATGACGATGTCTTGGGCGCATTATCGTTAGTAATGTACACGATAGCGCTTATTCCATTAGCGAAGTATGTTTTCATAGTTCTCAAAGCTAATGATAACGGAGAAGGAGGAACATTTGCACTTTACTCGCTGATTTGTAGGTATGCAAATGTGAATCTGCTTCCAAATCGGCAACAAGCTGATGAACAAATCTCTAGTTTTAAGCTCAAACTTCCTACTCCGGAACTTGAAAGGGCTTTAAAAATAAAGGAGGCTTTGGAAAGGACATCATTTTTGAAAAACGCATTGTTAGTGTTGGTTCTTATAGGAACTTCCATGATTATTGGAGATGGTATTCTAACTCCGGCGATATCAGTGATGTCTGCCATAAGTGGTCTACAGGATCAAGTAAATGGATTTGGTACAGGTGAAGTGGTTGGTGTATCTATTGTAGTCCTTGTGGCTTTGTTCAGCATTCAACGGTTCGGTACCGGTAAAGTGGGTTTCATGTTTGCCCCTGTACTTGCTTTATGGTTCTTTTCTCTGGGTTCTATTGGAATATATAATATCCTTAAATACGATATTACTGTTTTGAGAGCATTCAACCCGGCATATATCTTTTATTTCTTCAAGAATAATGGCAAAAGTGCATGGTCAGCTCTTGGTGGTTGTGTTCTATGCATTACAGGTGCAGAAGCAATGTTTGCAGATTTAGGACATTTTTCTGTACCAGCAATACAGATTGCTTTCACTTGTGTGGTATTTCCATGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTTTCTGATGAAAAACCCCGCTTATTATTCAAGCGTATTCTACAAATCTGTTCCAGAGAGTCTCTTCTGGCCAGTGTTTGTTATAGCCACACTTGGTGCTATGATTGCCAGCCAAGCAATGATATCTGCTACATTTTCATGCGTTAAGCAATCGATGGCTTTGGGATGCTTCCCCAGGCTCAAGATAATTCATACCTCAAGAAAGTTCATGGGTCAAATTTACATTCCTGTGATAAATTGGTTTCTGATGATCATGTGCATTGTTGTCGTTTCCATCTTCAAAAGCACTACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATGGTTAGCACAACCTTGGTGACACTTGTAATGCTTTTAATTTGGCAGACTAACTTGTTTTTAGCATTATGTTTCCTACTTGTATTTGGTTCAGTGGAGCTCATCTACATGTCTTCTGTCCTATCGAAAATCTTCGAGGGTGGCTGGCTTCCACTCGCCTTTGCTACGTTCTTCCTCTCCGTGATGTACACGTGGAACTACGGCAGTGTATTGAAGTACCGAAGGGAAGTCAGAGAAAAAATTTCAATGGACTTAATGCTTGATCTCGGCTCAAATCTCGGAACGGTTAGAGTGCCTGGAATAGGATTGCTATATAATGAACTTGTCCAGGGTGTTCCCTCCATTTTGCTGCAGTTCTTGCTAAGCCTTCCAGCTCTTCACTCTACCGTAGTTTTCGTCTGCATTAAATATGTCCCGATTCCTGTGGTTCCTCAAGAAGAAAGATTTCTATTCCGAAGAGTTTGTCCGAAAGATTACCATATGTTCCGCTGCGTTGCAAGGTACGGTTACAAAGATGTTAGGAAGGAAGATCACCATGCATTCGAGAAACTTCTTATCGAAAGTCTTGAGAAATTCTTGAGAAGGGAAGCACAAGAAGCTGCATTGGAGTTGGAGGGAAACTTAAACAACGACCCGGACAGCGTCTCCGTGGATGCAAGAAATTCTGATCTTCCGGACGGTACTGCGGTAGAAGAGCTTAGGATTCCACTAATGCAGGGTCAGAGTTTGAAAAAAACAGAAACTTCTACCTCCCATGAAGCTGCATTGACACTACCGTCTAGTTACATGTCATCGGACGAAGATCCTAGTCTCGAATACGAGCTTTCGGCTCTTAGAGAAGCAATGGATTCAGGATTCACCTATTTGCTTGGACATGGAGATGTGAGGGCAAAGAAGAACTCTTTTTTCTTTAAGAAATTGGTGATAAACTATTTCTATGCATTTCTAAGAAAGAATTGCAGAGGTGGTACTGCAAATATGAAAGTACCTCACACCAATGTCATTCAAGTGGGGATGACATATATGGTATGA 2562 0.4141 MKLDRIEESSSSVRLLGGRSKSSSDGASSESRWVDGSEVDWDEAPPWSNKNDNHGSDGGREGYGSNSIRRRLIKKPKRVDSFDVQAMQIAASHDQHSKDLSLLPTIALAFQTLGVVYGDMGTSPLYVFADVFSKVPIGSDDDVLGALSLVMYTIALIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEQISSFKLKLPTPELERALKIKEALERTSFLKNALLVLVLIGTSMIIGDGILTPAISVMSAISGLQDQVNGFGTGEVVGVSIVVLVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGIYNILKYDITVLRAFNPAYIFYFFKNNGKSAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTCVVFPCLLLAYMGQAAFLMKNPAYYSSVFYKSVPESLFWPVFVIATLGAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLMIMCIVVVSIFKSTTDIANAYGIAEVGVMMVSTTLVTLVMLLIWQTNLFLALCFLLVFGSVELIYMSSVLSKIFEGGWLPLAFATFFLSVMYTWNYGSVLKYRREVREKISMDLMLDLGSNLGTVRVPGIGLLYNELVQGVPSILLQFLLSLPALHSTVVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEKLLIESLEKFLRREAQEAALELEGNLNNDPDSVSVDARNSDLPDGTAVEELRIPLMQGQSLKKTETSTSHEAALTLPSSYMSSDEDPSLEYELSALREAMDSGFTYLLGHGDVRAKKNSFFFKKLVINYFYAFLRKNCRGGTANMKVPHTNVIQVGMTYMV 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01977 853 MobiDBLite consensus disorder prediction 13 31 - -
Car07g01977 853 MobiDBLite consensus disorder prediction 1 67 - -
Car07g01977 853 TIGRFAM kup: potassium uptake protein 108 853 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car07g01977 853 PANTHER POTASSIUM TRANSPORTER 12-RELATED 23 853 - -
Car07g01977 853 Pfam K+ potassium transporter 109 682 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car07g01977 853 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 853 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01977 Car-Chr7 23096156 23102523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01977 3 853 Inorganic Solute Cotransporters AT1G60160 73.715 0.0 1249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01977 K03549 - gmx:100814419 1414.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01977 07 23096156 23102523 Car07g01977 07 23096156 23102523 ECH
Car02g00599 02 7157626 7163168 Car07g01977 07 23096156 23102523 PCT