Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01973 ATGGCTTCTTCAATCAGAATCTCAAGACTCATttctcgttcattttcttctgcttcttctatttctttgttttctCGTGGTGGGAATGGTTATGTGGGTGGATTACTCTCTAAATACAGTACTGCTGCTGCTGTTGAAGAACAACCAATTAAGCCAACGGTACAAGTAGACCACACACAACTCTTAATTGATGGCAAATTTGTAGATGCTGCTTCTGGTAAAACTTTTCCAACATTGGATCCAAGGACAGGGGAAGTGATTGCTCATGTTGCTGAAGGTCACGCTGAAGATGTTGATAGAGCGGTTGCTGCTGCACGTCAAGCATTCGATCATGGGCCATGGCCTAAGATGACAGCCTATGAAAGGCAAAGGATATTGTTGCGTGCTGCTGATCTAATTGAAAAACATAACGATGAACTTGCAGCACTTGAGACTTGGGATAATGGGAAGCCATTTGAACAATCTGCTAAAACTGAAGTCCCAATGCTGGTTCGCCTAATTCGTTACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAATTCCAGCTGATGGACCACATCATGTGCAAACATTGCACGAACCGATCGGTGTTGCTGGTCAGATTATTCCATGGAACTTTCCTCTTCTCATGTTTGGTTGGAAGGTCGGTCCGGCATTGGCATGCGGCAACACTGTTGTTTTGAAAACAGCTGAGCAGACACCATTGTCGGCTTTGTATGCAGCAAAACTATTTCATGAGGCTGGACTTCCTCCTGGTGTTTTGAATATAGTGTCTGGATTTGGTGCAACTGCAGGTGCTGCTCTTGCTAGTCACATGGATGTTGACAAGCTTGCATTTACAGGTTCAACTGATACTGGAAAAGCCGTTCTTCAACTGGCAGCAAAAAGCAATCTTAAACCTGTAACTTTGGAGCTTGGTGGAAAATCTCCTTTTATTGTATGCGAAGATGCTGATGTAGATCAAGCTGTCGAGCTAGCACACTCTGCCTTATTTTTCAACCAGGGACAATGTTGCTGCGCTGGATCTCGGACGTTTGTACACGAAAGTGTGTATGACGAGTTTGTTGAGAAAGCAAAGGCTCGTGCTTTGAAACGTGCTGTGGGAGATCCCTTCAAGTCAGGAACCGAGCAAGGTCCTCAGATTGATTCAAAGCAATTTGAGAAAATACTGAAGTACATTAAATCTGGTGTTGAAAATGGTGCTACACTTGAAACTGGAGGAGAAAGGCTTGGCAGCAAGGGCTTCTATATTCAGCCTACTGTCTTCTCAAATGTTCAGGATGACCATCTGATTGCAAAGGAGGAGATATTTGGTCCAGTGCAATCCATATTAAAATTCAAGGACCTTGGTGAGGTAATTCAAAGAGCAAACAATACAGAGTATGGTCTTGCAGCCGGCATCTTCACAAAGAACATAGACACTGCTAATACTTTGACAAGAGCATTGAAAGTTGGATCAGTTTGGGTGAATTGCTTTGATATACTTGATGCTGCAATTCCTTTTGGTGGGTATAAGATGAGTGGACACGGCAGAGAAAAAGGAGAGTACAGTCTCAAGAACTACTTGCAAGTGAAGGCTGTTGTTATACCCTTGAAGAATCCAGCATGGCTTTGA 1620 0.4253 MASSIRISRLISRSFSSASSISLFSRGGNGYVGGLLSKYSTAAAVEEQPIKPTVQVDHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEGHAEDVDRAVAAARQAFDHGPWPKMTAYERQRILLRAADLIEKHNDELAALETWDNGKPFEQSAKTEVPMLVRLIRYYAGWADKIHGLTIPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFGWKVGPALACGNTVVLKTAEQTPLSALYAAKLFHEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKAVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHSALFFNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRAVGDPFKSGTEQGPQIDSKQFEKILKYIKSGVENGATLETGGERLGSKGFYIQPTVFSNVQDDHLIAKEEIFGPVQSILKFKDLGEVIQRANNTEYGLAAGIFTKNIDTANTLTRALKVGSVWVNCFDILDAAIPFGGYKMSGHGREKGEYSLKNYLQVKAVVIPLKNPAWL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01973 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 333 344 IPR016160 GO:0016491
Car07g01973 539 SUPERFAMILY ALDH-like 54 534 IPR016161 GO:0016491
Car07g01973 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 311 500 IPR016163 GO:0016620
Car07g01973 539 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491
Car07g01973 539 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 33 539 - -
Car07g01973 539 CDD ALDH_F2BC 56 530 - -
Car07g01973 539 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 33 539 - -
Car07g01973 539 Pfam Aldehyde dehydrogenase family 67 529 IPR015590 GO:0016491
Car07g01973 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 529 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01973 Car-Chr7 22985615 22995418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01973 6 539 Aldehyde Dehydrogenase Gene Family AT3G48000 77.715 0.0 892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01973 07 22985615 22995418 Car07g01973 07 22985615 22995418 ECH