Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01969 ATGCAGAAACAACTCAGTCACAACATACTTCGCACCCTCTTCATCTTCACCATCATCCTTCTCTCCACACTCACCTTTTGTTTAGCAATTGATAATGCAAAAGAGAAAAACCAAAACCCGTTCACTCCAAAGGCCTTCGCAATTCGCTATTGGGACAGAGTAATAAAAAACAACTTGCCAAAACCATCCTTCATTTTTTCAAAGGCTTCGCCGCTTAGCGCCGTCGACGCAGCGGCTTTCGCAAAACACGCTGCCGCCAACACGCTATCCACAAAGTTGCCGGAATTTTGCTCCGCCGCACACCTCCTCTGTTTCCAAGACATAAATCCAAGCCTCGAGAAATTCCCTAAGGACACTGATTTCGCAGTTTACAACAAAGCCGAGAATTTCACTAACTACGGAACGAGTCAACCCGGTGGACTCAGCTCGTTCAAAAACTACTCCATCGGTTTATTAAGCGCCGAGCTCAATGAATTCCGAACATACAGCCGCGACTCCGCTAGCCACAATGAAAGCTTCACTACCTACGCGGAGAACACTAACGCGGCGGAAGAGAAATTCAACACCTACGGAACCTTCGCTGCCGCCGGATCAGGCGATTTCAAAGTATACGCTAAAGATTCAAACGTTCCTAACCTAGATTTCAACACCTACTCCGTTTCCACCGCCGGAAGAGAACAAACGTTCACAAGCTACAGCGAAGCCGGAAACGCCGGTAACCAGAGTTTCACAAATTACGGCAAAGATTCCACCCGCGCCGCTAACCGTTTCACGGCGTACGGAACAAGCGCTAACGTCTTCAATTCCGATTTCTCTTCCTATACAGAAAAAGGTACGAGCGCTAACGATACTTTCACGAACTACGGTTTTAATCTGAACAATCCAGTTAATAATTTCAAGGATTACGGTAAGGGAAGTTCCAGTGCGAATGAGAAGTTCACAGAATACAGAGACGAAGCTAATGCTGGTAGTGATTCGTTCAATTCGTACGGTGAAAGTTCACGTGCTGGAATCCACGTTGATTTCAATAACTACGGTCGTAAACCTGGTTTTCCAAAATTAGGAAGTGACACTTTTAAAGGCTATGGTAAAGAAGCTGATTTAGATCATAAGATGAGTTTCAAAAGTTACGGTGTTGGTAACCCCCTCAAGGATTACTCCAAAAATGGTATTTCATTTTCTAGTTATACTAAATCTTCTTCAACTAACTCTGTTACCGTTAATGGTAGTTTGGTAAAAAATTGGGTTCAGCCTGGTAATTTTTTCCGCGAAGGGATGTTGAAGGAAGGGACGGTTATGCCAATGCCGGATATAGTGGATAAATTACCAAAAAGGTCTTTTTTGCCCCGATCTATTTTGACTAAATTGCCATTTGCATCCTCCAAGTTAAATGAGATGAAGCATGTTTTTAGGGTGGCTGAGAAATCCTCTATAGAAAAGATGATAGTGGATGCGTTGAGTGAGTGCGAGAGGTCTCCTAGCCAAGGTGAGACTAAGCGTTGTGTGGGTTCGATTGAGGACATGATTGACTTTGCAACTTTTGTTTTGGGCCGTAATTTGACAGTTCGGTCCATTGAAAATGTAAATGGATCAGGTAAAAATGTTATGGTTGGTCGGGTTAAAGGGATAAACGGTGGAAAAGTGACACAATCGGTGTCGTGTCATCAGAGTTTGTTCCCTTATTTATTATATTATTGTCATTCGGTTCCAGATGTTCGAGTTTATGAAGCGGATCTTTTAGAGCCTAAGTCAAAGGTTAAGATTAATCATGGTGTTGTTATATGTCATTTGGATACTAGTGCTTGGAGCTCCACTCATGATGCATTTGTGGCTCTAGGTTTTGGTCCGGGTCAGATTGAAGTTTGTCACTGGATCTTTGAAAATGACATGACTTGGACTACCGTTGATTGA 1911 0.4322 MQKQLSHNILRTLFIFTIILLSTLTFCLAIDNAKEKNQNPFTPKAFAIRYWDRVIKNNLPKPSFIFSKASPLSAVDAAAFAKHAAANTLSTKLPEFCSAAHLLCFQDINPSLEKFPKDTDFAVYNKAENFTNYGTSQPGGLSSFKNYSIGLLSAELNEFRTYSRDSASHNESFTTYAENTNAAEEKFNTYGTFAAAGSGDFKVYAKDSNVPNLDFNTYSVSTAGREQTFTSYSEAGNAGNQSFTNYGKDSTRAANRFTAYGTSANVFNSDFSSYTEKGTSANDTFTNYGFNLNNPVNNFKDYGKGSSSANEKFTEYRDEANAGSDSFNSYGESSRAGIHVDFNNYGRKPGFPKLGSDTFKGYGKEADLDHKMSFKSYGVGNPLKDYSKNGISFSSYTKSSSTNSVTVNGSLVKNWVQPGNFFREGMLKEGTVMPMPDIVDKLPKRSFLPRSILTKLPFASSKLNEMKHVFRVAEKSSIEKMIVDALSECERSPSQGETKRCVGSIEDMIDFATFVLGRNLTVRSIENVNGSGKNVMVGRVKGINGGKVTQSVSCHQSLFPYLLYYCHSVPDVRVYEADLLEPKSKVKINHGVVICHLDTSAWSSTHDAFVALGFGPGQIEVCHWIFENDMTWTTVD 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01969 636 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 15 635 - -
Car07g01969 636 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 15 635 - -
Car07g01969 636 ProSiteProfiles BURP domain profile. 421 635 IPR004873 -
Car07g01969 636 SMART BURP_2 419 635 IPR004873 -
Car07g01969 636 Pfam BURP domain 421 633 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01969 Car-Chr7 22861552 22863969 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01969 - - var:108321369 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01969 07 22861552 22863969 Car07g01969 07 22861552 22863969 ECH
Car08g01089 08 10795227 10798055 Car07g01969 07 22861552 22863969 PCT