Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01964 ATGGATAATAACGAAAGAGGCTCAAACAAGGCTTGTGCATCTTGCAAATTTCAAAGAAGAAAGTGTTCTAAAGATTGTCCTTTAGCTCCTTATTTTCCTGCCAATAAACCAAAAACTTTTAGCAACGTTCATCGTTTGTACGGTTATTCCTACATTTCAAAATTACTAAAACGCATAGATGATGGTAAAAAAGATGAAGCAATGACGTCAATTATTTACGAGTCCAATATTCGTTCTATGTTTCCAGTTTATGGATGTGCCGGTGTTATTAATATCCTTCAAAGTAAGTTACATAATGCTACCTTAGAATTAAATTATATACAAAATTTACTAAATATTTTTAAGCAAAAACACCCTTCACAACAAAAAAATCTTGTACCAATGGGTAATAATTCTATTTCGATGCCTTCGACTAGTTGCCAAATTCCAAATGATCCCATATGTAACAATATTGGTGATGGTTCATTTTTTTACGACAATAGTGAAAATAATAATTTTATGATTAGTGACACCATCCCTAATGATGTTAACAATATTACTTCCATTGATTCAAAAAATGAGTTGGAGGAAAATTCTAATTTGATGGCAACTCAAGGAGATTTGGAACATAATTATTTTGCTGTCGATGTCCAAAGGAAGAAGGATGAATTTGGTACAGAATCGAGTAGGTTGTTGCATGGTGAACAACATCCACAAATTACGCAACAAGATGCAGCTAAATCTTCCAGTGTGGGATCAGCTGAACAAGAACATGATAAAAATAGCAAGCATGGAGACGAATGA 783 0.3308 MDNNERGSNKACASCKFQRRKCSKDCPLAPYFPANKPKTFSNVHRLYGYSYISKLLKRIDDGKKDEAMTSIIYESNIRSMFPVYGCAGVINILQSKLHNATLELNYIQNLLNIFKQKHPSQQKNLVPMGNNSISMPSTSCQIPNDPICNNIGDGSFFYDNSENNNFMISDTIPNDVNNITSIDSKNELEENSNLMATQGDLEHNYFAVDVQRKKDEFGTESSRLLHGEQHPQITQQDAAKSSSVGSAEQEHDKNSKHGDE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01964 260 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Car07g01964 260 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Car07g01964 260 MobiDBLite consensus disorder prediction 246 260 - -
Car07g01964 260 MobiDBLite consensus disorder prediction 218 260 - -
Car07g01964 260 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 194 - -
Car07g01964 260 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 8 194 - -
Car07g01964 260 MobiDBLite consensus disorder prediction 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01964 Car-Chr7 22678687 22680587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01964 7 115 AS2 family AT3G47870 49.541 6.00e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car07g01964 LOB 7.7e-34 No_clan