Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01958 ATGGCTCCAAATCTCACCAATAATATAAACAACGATTCTTTTTCTTATTCTCCTCCAATTTTACATTTCAATAATTCTACTAAACAATCAGCCAAAGAAAATCATGATAAAGATGCAGCTCCACCACCGAACTCCGGTCCACTGGAAAGCTCTCCGTCAGACTcgccgccgccgcctcctccacggcagccgaagactccgccgccaccgaaagtttcaccgccgttacaatcaccaccacctccaccgcctccaccacctccgccaccgccgcctccaccaccaagatcatcaccaccaccgccttctccaccgccaaactcatcgcctccaccaccttcatcaccatcaccatctccaccaccaatttcccctccaccgccgcaactgccgccgccaccaTTGCACAAAGCAAATTCTTCTTCACCTCCTCCTAATTTTCCACGTAAACAACCACCTCGGCCGCAGTTTCGGTCTCCGCCACCACCTAAGAGGTCTTCTTCATCTCCATCCTCGAATGATTCGCCACATAGAGCTATGCATGCAAAATCAAGAGGTTCTTCTTCGCCTGGATCCTCACCCGGCGAAATAGTAGGATATACCCTCGCCGGAGTTTTTGCTGTTGCCTTAGTTGTCGCAGCTATTATTTTCGCGTTTAGAAGGAAGAAAACGAGAGGGGATTTGTATGGTGTACCCTATATGCCACCCCCGATTAATAACTATCACCTTAAATCAGGTGCTGATGGACATTACTATGTACAGCACCATTCCTTTAATAACATTTATGGCAATGGCAACATTGGAGGAGGCAGCATGAAGCATTCAGTAGGAGGACCTTTAGATATGGCGCAGCCCAAGAGTGCACAGATAGTTTTTAGTTATGAAATGGTAATGGAAATAACCAATGCATTTTCTAGTCAAAATGTGATAGGGCAAGGAGGATTTGGGTGTGTTTACAAGGGTTGGCTACCAGACGGAAAAGAAGTGGCGGTCAAGCAACTTAAGGCCGGTAGTGGGCAGGGAGATAGGGAATTCAGAGCTGAAGTAGAGATCATTAGCCGTGTTCATCATCGTCATTTGGTATCATTGGTTGGTTATTGCATATCTGAGGAACAAAGAGTGCTTATCTACGAGTTCGTTCCTAATGGAAATCTCCATCATCACTTGCATGGAAATGGAGTACCAGTGTTAGATTGGACCAAGAGGCTGAAGATAGCTATTGGTGCTGCAAAGGGCCTGGCATATTTGCATGAGGACTGTAACCAAAAGATTATTCACAGAGATATTAAGTCAGCCAACATACTTTTGGATGATGCTTTTGAGGCACAGGTTGCAGATTTTGGACTTGCAAGGCTAGCTGATGCTGCCAATACTCATGTATCAACCAGGGTTATGGGTACCTTTGGTTACATGGCTCCTGAATATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTCTTCTCATTTGGGGTTGTCCTCCTTGAGCTTGTAACTGGAAGGAAACCGGTTGATGAAACTCAACCTTTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCAACTACTTATCCATGCATTTGAGACACGTGATTTTAGAGAACTAGTAGACCCAAGGCTAGAAAATCATTATGTGGAGAGTGAAATGTTCAGAATGATAGAGGCAGCTGCAGCTTGTGTTCGCCACTCAGCTCCTAAAAGGCCTCGTATGTCTCAGGTAGTAAGAGCTTTAGACAGAGGAGATGAAATATCTGATTTATCAAATGGAGTAAGATATGGTCAAAGCACTGTTTATGATTCAGGTCAATATGACAAAGACATAATGCTATTCAGGAGGATGGGAAATGGAAGCTTTGGTGATTCTGATTTTGATATATACAGTCAAGAATACAATCTTTCAAGAGAGACATCTAGATCAAAGCATGCATGGATGCACAGTAGTTCTAGCGGTGAGTCGGAATCTAAAGCTTTCAACAAACGTAGGGGAAGTGCTGAATGA 1998 0.3749 MAPNLTNNINNDSFSYSPPILHFNNSTKQSAKENHDKDAAPPPNSGPLESSPSDSPPPPPPRQPKTPPPPKVSPPLQSPPPPPPPPPPPPPPPPPRSSPPPPSPPPNSSPPPPSSPSPSPPPISPPPPQLPPPPLHKANSSSPPPNFPRKQPPRPQFRSPPPPKRSSSSPSSNDSPHRAMHAKSRGSSSPGSSPGEIVGYTLAGVFAVALVVAAIIFAFRRKKTRGDLYGVPYMPPPINNYHLKSGADGHYYVQHHSFNNIYGNGNIGGGSMKHSVGGPLDMAQPKSAQIVFSYEMVMEITNAFSSQNVIGQGGFGCVYKGWLPDGKEVAVKQLKAGSGQGDREFRAEVEIISRVHHRHLVSLVGYCISEEQRVLIYEFVPNGNLHHHLHGNGVPVLDWTKRLKIAIGAAKGLAYLHEDCNQKIIHRDIKSANILLDDAFEAQVADFGLARLADAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDETQPLGDESLVEWARQLLIHAFETRDFRELVDPRLENHYVESEMFRMIEAAAACVRHSAPKRPRMSQVVRALDRGDEISDLSNGVRYGQSTVYDSGQYDKDIMLFRRMGNGSFGDSDFDIYSQEYNLSRETSRSKHAWMHSSSSGESESKAFNKRRGSAE 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01958 665 CDD STKc_IRAK 310 579 - -
Car07g01958 665 MobiDBLite consensus disorder prediction 642 665 - -
Car07g01958 665 PRINTS Proline rich extensin signature 54 70 - -
Car07g01958 665 PRINTS Proline rich extensin signature 71 88 - -
Car07g01958 665 PRINTS Proline rich extensin signature 90 115 - -
Car07g01958 665 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Car07g01958 665 Gene3D Phosphorylase Kinase; domain 1 273 379 - -
Car07g01958 665 MobiDBLite consensus disorder prediction 45 167 - -
Car07g01958 665 SMART serkin_6 304 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01958 665 MobiDBLite consensus disorder prediction 1 193 - -
Car07g01958 665 ProSiteProfiles Protein kinase domain profile. 304 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01958 665 Gene3D Transferase(Phosphotransferase) domain 1 380 591 - -
Car07g01958 665 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 33 647 - -
Car07g01958 665 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 33 647 - -
Car07g01958 665 MobiDBLite consensus disorder prediction 1 28 - -
Car07g01958 665 SUPERFAMILY Protein kinase-like (PK-like) 284 577 IPR011009 -
Car07g01958 665 Pfam Protein tyrosine and serine/threonine kinase 307 577 IPR001245 GO:0004672|GO:0006468
Car07g01958 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01958 Car-Chr7 22507347 22512112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01958 190 632 Trihelix Transcription Factor Family AT1G70460 62.203 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Car07g01958 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01958 - - lang:109330554 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01958 07 22507347 22512112 Car07g01958 07 22507347 22512112 ECH