Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01930 ATGAATATTAACAACAACGATGATGATGACAAAGTCACCATGGACCTTGTTCCATCATCTGACCACTTCTGCTACGTTCGTTGCAATTTCTGTAACACTGTTCTTGCGGTTGGCATCCCTTGCAAGAGGCTTGTAGATACTGTGACGGTGAAGTGTGGTCACTGCAGCAACCTCTCATTTCTTAGCACCAGACCTTCATACAATCAAAATCATGCCATTGATCATTCACTCACTCTTCATCACCAGAGGTTTTACAGTGATTTGAAAAAAGGCCAAGCATCATCTTCATCATCCTCAACAACCACTTCTGGAGAGCCCGTGTCCCCTAAAGCTGCACCCTTTGTTGTCAAACCACCTGAGAAGAAGCATAGGCTCCCATCTGCTTACAATCGTTTCATGAAAGAGGAGATACAGCGCATAAAAGCAGCAAACCCTGAAATCCCACATCGAGAAGCTTTCAGTGCTGCAGCAAAAAATTGGGCTAGGTACATTCCCAATTCGCCAACTTGTTCGGTTTCTGGAACTAAAAAAATATGA 537 0.4376 MNINNNDDDDKVTMDLVPSSDHFCYVRCNFCNTVLAVGIPCKRLVDTVTVKCGHCSNLSFLSTRPSYNQNHAIDHSLTLHHQRFYSDLKKGQASSSSSSTTTSGEPVSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSPTCSVSGTKKI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01930 178 Pfam YABBY protein 19 163 IPR006780 GO:0007275
Car07g01930 178 MobiDBLite consensus disorder prediction 90 107 - -
Car07g01930 178 CDD HMGB-UBF_HMG-box 124 160 - -
Car07g01930 178 PANTHER PROTEIN YABBY 6-RELATED 12 175 IPR006780 GO:0007275
Car07g01930 178 PANTHER PROTEIN CRABS CLAW 12 175 - -
Car07g01930 178 SUPERFAMILY HMG-box 107 161 IPR036910 -
Car07g01930 178 Gene3D High mobility group box domain 110 165 IPR036910 -
Car07g01930 178 MobiDBLite consensus disorder prediction 90 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01930 Car-Chr7 22084612 22088022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01930 18 174 C2C2-YABBY Transcription Factor Family AT1G69180 68.354 8.55e-65 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Car07g01930 YABBY 1.2e-55 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01930 K25796 - gmx:100795791 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01930 07 22084612 22088022 Car07g01930 07 22084612 22088022 ECH