Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01928 ATGGAGTTATTTCCAGCACAACCAGATTTGTCATTGCAAATCAGCCTTACAAACAACAATGAAACAACATCATCATCAAGTTGGagaagaaatacaaatgaagaagaagaagaagaagaagaaATTGATTTAGGATTTTGGAAGAGAGCTTTGGATTCAAATTCAAGATCAAACACGTTTGATCTTTCTCTCTCCAATCCATTAAGTGCTtcttcttcatcatcatcatcttcaAACCCCAATTTGATAACACACCCTTTTCACAACAATAATAATTCCAACAACCCATTTCATCAAAGCCACTACTTTCAAAATCAAAACAACAACAAGAAAAGCTTAAGTGAAGAATTAGGTTTTCTAAAACCTATAAGAGGAATTCCAGTTTATCATCAAAAGGCTTCTCCTAATAATCCTTTTGCATTATTTTCTTCTCAAAAACCCTTTGATGTTGTTGCTTCTTCTTCTTCTTCAACAACTTTTCATTCTCAAAGTTTGATGAGATCAAAGTTTTTGCCACGGTTTCCTTCAAAACGTAGCATGAGAGCTCCAAGGATGCGTTGGACTGCCACTCTTCATTCTCGCTTTGTTCATGCTGTTCAGCTTTTGGGTGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTAACTTTATCACATGTTAAATCTCATTTGCAGATGTACCGGACGGGGAAAATTACAGATAGAGCAGGGGCATCATCAGGGCAATCTGATATTAATTATGATAATGGTTCATCTGGAGATACTTCTGAAGACTTTATTTTTGACATAAACTCTTCAACAAGGTCTAATGATCCACCAATTAAGTTACCTACAGAAATTACTAATCATGATAAAGAAAATTGTGGCCTTTGGAGCTCTTCCAGTGAACCTTGGTTGCATGCTAAGCCAAACCTCCATCCTCTTCCAATCATCCCTTCTCTTCAGGGAATGGATCCAAAGTGTCTAAGCAACGAAAGAAATTCAGATGGAAGTTGTTCCTCAAACATTTCAGGAACAAGCCTCAAGAAGACAAATTTGGATTTGGAATTCACTTTGGGAAGGTCACTTTGA 1092 0.3526 MELFPAQPDLSLQISLTNNNETTSSSSWRRNTNEEEEEEEEIDLGFWKRALDSNSRSNTFDLSLSNPLSASSSSSSSSNPNLITHPFHNNNNSNNPFHQSHYFQNQNNNKKSLSEELGFLKPIRGIPVYHQKASPNNPFALFSSQKPFDVVASSSSSTTFHSQSLMRSKFLPRFPSKRSMRAPRMRWTATLHSRFVHAVQLLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTGKITDRAGASSGQSDINYDNGSSGDTSEDFIFDINSSTRSNDPPIKLPTEITNHDKENCGLWSSSSEPWLHAKPNLHPLPIIPSLQGMDPKCLSNERNSDGSCSSNISGTSLKKTNLDLEFTLGRSL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01928 363 MobiDBLite consensus disorder prediction 63 103 - -
Car07g01928 363 MobiDBLite consensus disorder prediction 242 260 - -
Car07g01928 363 SUPERFAMILY Homeodomain-like 180 236 IPR009057 -
Car07g01928 363 MobiDBLite consensus disorder prediction 1 42 - -
Car07g01928 363 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 362 IPR044847 GO:0000976|GO:0006355|GO:0010158
Car07g01928 363 Gene3D - 182 239 - -
Car07g01928 363 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 183 237 IPR006447 GO:0003677
Car07g01928 363 MobiDBLite consensus disorder prediction 10 29 - -
Car07g01928 363 Pfam Myb-like DNA-binding domain 184 235 IPR001005 -
Car07g01928 363 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 362 - -
Car07g01928 363 MobiDBLite consensus disorder prediction 241 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01928 Car-Chr7 22038651 22044927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01928 1 360 G2-like Transcription Factor Family AT4G17695 37.731 6.16e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car07g01928 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01928 - - aprc:113868756 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00925 08 8413182 8418737 Car07g01928 07 22038651 22044927 PCT