Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01920 ATGTCATCAAAAAGAGGTTCATTATCAAGGAGGAAGGTTCCATTGCTCAAGCTTTTCTCATTTGCTGATTTCTACGATTATGTGTTGATGGCCGTTGGATCTGTTGGTGCATGCATTCATGGTGCATCTGTTCCTATTTTCTTTATCTTCTTTGGAAAAATTATTAATGTTATTGCCTTGGTTTACCTTTTTCCCAAAGAAGCTTCTCACCAAGTTGCCAAGTATTCATTGGATTTTTTGTATCTAAGTATATTAATATTGTTTTCATCATGGGCAGAGGTAGCTTGTTGGATGCATACTGGAGAACGTCAAGCAGCAAAGATGAGAATGGCATATTTAAGATCAATGTTGAATCAAGATATAAGTCTTTTTGATACTGAGGTTTCAACTGGAGAGGTTATTTCTTCTATTACGAGTGACATCTTAATTGTTCAAGAGGCATTATCTGAGAAGGTTGGAAACTTTATGCACTATATAAGTAGATTTTTAGCGGGATTTATTATCGGTTTTATAAGAGTGTGGCAGATAAGTTTAGTGACACTTGCAATTGTTCCTTTGATTGCTATTGCTGGAGGCCTTTATGCCTATGTCACAATTGGCCTTGTTGCAAAGGTTCGTAAATCATATGTCAGAGCTGGTCAAATCGCTAAAGAGGTTATAGGAAATGTAAGAACTGTACAAGCATTTGGAGGAGAGGAAAGAGCAGTGATATCATACAAAGTGGCTTTGAGGAACACATATAAGAATGGTAGAAAAGCAGGTTTAGCAAAGGGCCTAGGATTAGGCTCTATGCATTGTGTCCTTTTTCTATCATGGGCTCTTCTTGTTTGGTTCACCAGCATTATTGTTCATAAAAAAATTGCCAATGGTGGACTGGCTTTCACTACTATGCTCAATGTCGTCATTTCTGGCCTGTCACTTGGACAGGCAGCACCAGACATTTCTGCATTTATCAGAGCAAAGGCAGCAGCTTATCCCATTTTTGAGATGATAAAGAGGGACACAGTTAGCAAAAACAGCTCGAAAATCGGTCGGAAATTAATTAAACTAGATGGTCACATTCAACTTATCAATGTTTGTTTCAGTTATCCATCTCGCCCCGATGTTGTTATCTTCAACAATCTTAGTCTTGATATTCCTTCAGGTAAAGTTTTGGCTCTTGTAGGAGGGAGTGGTTCAGGAAAAAGCACAATTATATCACTGATTGAACGTTTTTATGAACCACTTTCTGGTCAAATTCTATTGGATAGGAATGATATAAAAGAACTTGATATAAAATGGCTAAGACATCAAATTGGACTAGTTAATCAAGAGCCTGCACTTTTTGCTACTAGCATAAGGGAGAATATATTGTATGGTAAAAATGATGCAACAGTTGAAGAACTAAATAGTGCTTTGGAACTTTCTGATGCCATGAATTTCATCAACAATCTTCCTGATGGATTAGATACTCAGGTTGGTGAAAGAGGGATACAATTATCAGGGGGACAAAAACAAAGGATCGCGATATCTCGTGCTATAGTTAAGAATCCATCAATCCTTTTACTAGATGAAGCAACTAGTGCTCTTGATGCAGAGTCTGAGAAAAGTGTACAAGAGGCTCTTGATCGTGTCATGATTGGTAGAACAACTGTGATAGTTGCACATAGACTTTCTACCATTAGGAATGCAGATATAATAGTTGTTGTTGAAGGAGGGAATGTTGTGGAAATTGGAAATCATGTGGAGCTTATTTCCAATCCAAATAGTGTTTATGCATCTCTTGTTCAAGGTCACCCTTCTCCAGATCCTTGCTTAGGACAATCGTCAAGCATAAAGAACTCAGTAGAAATATCCAATACAGCAACTATTGGTAGTAGTTTTCATTCTGATAAAGAATCTACTAGCCATGCATGTGGTGATGAAGCAAGAAGTGTTGAAAAATCAAAGCATGTCTCATTAGCAAGATTATATTCCATGATTGGTCCTTATTGGTCTTATGGAGTTTTTGGAACTTTATCTGCTTTCATTACTGGTGCTCTTATGCCACTTTTTGCTCTTGGAATCTCTCATGCTCTTGTTTCTTATTATATGGATTGGCATAACACACAACATGAAGTGAAAAAAATTGCTTTTCTTTTCTGTGGAGCAGCAATTATAGCTATCACTGCATATTCCATTGAACATCTTTCTTTTGGAATCATGGGAGAGAGACTTACTCTTCGTGTCAGGGAAATTATGTTTTCTGCTATTTTGAAGAATGAAATCAGTTGGTTTGATGATACAAGAAACACAAGTTCTATGCTTTCATCGCGTTTAGAGACTGATGCAACTTTGTTAAAAACTATAGTGGTTGACCGTTCTACAATTCTCATGCAGAATGTTGGTTTAGTTGTTACTTCATTTATTATTGCTTTCATTTTAAATTGGAGGATAACACTTGTTGTCTTGGCCACATATCCTTTGATAATTAGTGGTCACATTAGTGAGAAACTTTTCATGCAAGGCTTTGGTGGAAACCTAAGCAAAGCATATCTAAAAGCAAACATGTTGGCTGGGGAGGCAATCAGTAATATAAGGACTGTGGCTGCATTTTGTGCAGAAGAAAAAGTTATTGACCTTTATGTTGATGAGCTTGTTGAGCCTTCTAAGCGTTCATTCAAAAGAGGCCAAATTGCTGGCATATTTTATGGCATTTCACAATTCTTTATTTTCTCATCTTATGGTCTAGCCTTATGGTATGGATCAGTCTTGATTCAAAAAGAGCTTTCTGGCTTTAAATCAATCATGAAGTCATTTATGGTTTTAATAGTAACAGCACTGGCTATGGGGGAGACTTTGGCACTAGCACCAGACCTTTTGAAAGGGAATCAAATGGTTTCATCAATTTTTGAAGTGATAGATAGAAAATCAGGAATAATACATGGTGTTGGAGAAGAGTTGAAGACGGTGGAAGGAACAATTAAGCTAAGAAGGGTCAATTTTAGCTATCCTTCAAGACCAAACATTGTTATTTTTAATGATTTCAATCTAACAGTGCCTTCAGGGAAGAGTTTTGCCTTGGTCGGACATAGTGGTTCTGGTAAAAGCTCAATAATCTCCCTTATACTTAGATTCTATGATCCAACATCTGGGAAGGTGATGATTGATGGAAAAGACATCAAGGAGATTAATTTGAAATCCCTAAGGAAGCATATTGGTCTAGTGCAACAAGAACCAGCTCTTTTCGCAACATCAATTTTCAAAAACATTCTATATGGAAAAGAAGAAGCCTCTGAATCAGAAGTGATTGAAGCAGCTAAACTAGCCAATGCTCATAATTTCATCAGTGCTCTTCCTCAAGGGTACTCAACCAAAACAGGCGAGAGAGGAGTTCAACTATCTGGTGGCCAAAAACAAAGGGTAGCCATTGCAAGAGCTATTCTAAGAAACCCCAAAATATTACTGTTGGATGAAGCTACAAGTGCACTAGATGTAGAATCAGAGAGTATTGTGCAGCAAGCTCTAGACAAGTTGATGCAAAACAGAACAACAATTATAGTGGCACATAGGTTATCCACAATAAAAAATGCAGATCAAATATCTGTTTTGCAAGATGGAAAGATTATTGAGCAAGGCACTCATTCAAGTCTTTTAGAGAACACAGATGGAGCTTATTTCAAATTAGCTAGTCTACAACAACAACTACATGTACAAGAGCATAATTGGTGA 3690 0.371 MSSKRGSLSRRKVPLLKLFSFADFYDYVLMAVGSVGACIHGASVPIFFIFFGKIINVIALVYLFPKEASHQVAKYSLDFLYLSILILFSSWAEVACWMHTGERQAAKMRMAYLRSMLNQDISLFDTEVSTGEVISSITSDILIVQEALSEKVGNFMHYISRFLAGFIIGFIRVWQISLVTLAIVPLIAIAGGLYAYVTIGLVAKVRKSYVRAGQIAKEVIGNVRTVQAFGGEERAVISYKVALRNTYKNGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSIIVHKKIANGGLAFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIKRDTVSKNSSKIGRKLIKLDGHIQLINVCFSYPSRPDVVIFNNLSLDIPSGKVLALVGGSGSGKSTIISLIERFYEPLSGQILLDRNDIKELDIKWLRHQIGLVNQEPALFATSIRENILYGKNDATVEELNSALELSDAMNFINNLPDGLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMIGRTTVIVAHRLSTIRNADIIVVVEGGNVVEIGNHVELISNPNSVYASLVQGHPSPDPCLGQSSSIKNSVEISNTATIGSSFHSDKESTSHACGDEARSVEKSKHVSLARLYSMIGPYWSYGVFGTLSAFITGALMPLFALGISHALVSYYMDWHNTQHEVKKIAFLFCGAAIIAITAYSIEHLSFGIMGERLTLRVREIMFSAILKNEISWFDDTRNTSSMLSSRLETDATLLKTIVVDRSTILMQNVGLVVTSFIIAFILNWRITLVVLATYPLIISGHISEKLFMQGFGGNLSKAYLKANMLAGEAISNIRTVAAFCAEEKVIDLYVDELVEPSKRSFKRGQIAGIFYGISQFFIFSSYGLALWYGSVLIQKELSGFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVSSIFEVIDRKSGIIHGVGEELKTVEGTIKLRRVNFSYPSRPNIVIFNDFNLTVPSGKSFALVGHSGSGKSSIISLILRFYDPTSGKVMIDGKDIKEINLKSLRKHIGLVQQEPALFATSIFKNILYGKEEASESEVIEAAKLANAHNFISALPQGYSTKTGERGVQLSGGQKQRVAIARAILRNPKILLLDEATSALDVESESIVQQALDKLMQNRTTIIVAHRLSTIKNADQISVLQDGKIIEQGTHSSLLENTDGAYFKLASLQQQLHVQEHNW 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01920 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 975 1219 IPR027417 -
Car07g01920 1229 CDD ABC_6TM_Pgp_ABCB1_D1_like 30 327 - -
Car07g01920 1229 Pfam ABC transporter transmembrane region 35 302 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g01920 1229 Pfam ABC transporter transmembrane region 663 934 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g01920 1229 SMART AAA_5 1008 1200 IPR003593 -
Car07g01920 1229 SMART AAA_5 381 567 IPR003593 -
Car07g01920 1229 CDD ABC_MTABC3_MDL1_MDL2 354 590 - -
Car07g01920 1229 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 9 1223 IPR039421 -
Car07g01920 1229 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 9 1223 - -
Car07g01920 1229 Pfam ABC transporter 1000 1148 IPR003439 GO:0005524
Car07g01920 1229 Pfam ABC transporter 373 521 IPR003439 GO:0005524
Car07g01920 1229 Gene3D - 344 612 IPR027417 -
Car07g01920 1229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 354 590 IPR003439 GO:0005524
Car07g01920 1229 ProSitePatterns ABC transporters family signature. 1120 1134 IPR017871 GO:0005524
Car07g01920 1229 ProSitePatterns ABC transporters family signature. 493 507 IPR017871 GO:0005524
Car07g01920 1229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 981 1217 IPR003439 GO:0005524
Car07g01920 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 590 IPR027417 -
Car07g01920 1229 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 662 948 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g01920 1229 Gene3D - 971 1228 IPR027417 -
Car07g01920 1229 SUPERFAMILY ABC transporter transmembrane region 649 962 IPR036640 GO:0005524|GO:0016021
Car07g01920 1229 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 31 319 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g01920 1229 CDD ABC_6TM_Pgp_ABCB1_D2_like 651 966 - -
Car07g01920 1229 CDD ABC_MTABC3_MDL1_MDL2 981 1219 - -
Car07g01920 1229 SUPERFAMILY ABC transporter transmembrane region 18 324 IPR036640 GO:0005524|GO:0016021
Car07g01920 1229 Gene3D ABC transporter type 1, transmembrane domain 17 950 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01920 Car-Chr7 21928919 21941312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01920 11 1225 Calmodulin-binding Proteins AT2G36910 49.920 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01920 K05658 - gmx:100809752 1966.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01920 07 21928919 21941312 Car07g01920 07 21928919 21941312 ECH