Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01916 ATGTCGTCTGCAGAACCCGACTATGACGTCCCGCCTGCCTCGGCGTACAGCACCCCACCAACATTGGTAGCGTTCACCCTCACCGTCCTCATCCTATGCTTCGTTGCTTTTAGCATTGTGTATCTTTGCAAGTATTGTTTTTCAAACGTTTTTCACACTTGGGACTTACAACGTACGGCCTCGGGAACCATCATTCGTCCTTCACCTGCTAGGTCACCTCCTAGGGGACTCGACGTTACCCTTCTAAATAGATTCCCTACTTTCGTCTACGCCTCCGTGAAGAACCTCCGCTTGAAGAAGAGTTATAGTTTGGAATGTGCCATTTGCTTGACTGAGTTTGAAGATGATAGTTTGCTTCGTCTCTTAACCATTTGTTGCCATGTTTTCCACCAAGAGTGCATTGATCTTTGGCTTCGTTCACACAAGACATGCCCCGTTTGTCGAACGGAGCTTGATTCACCTCCCAACCAAACATCAAAACATGGTGACGACAACAGCACCCGTAATGCGCAAGAGGATACGTTGTCGTTACCATGTGATGATATACGCATTGACGTGAGAGAAGAGGAAAATGGTGGTGTTGGTGAAATGACTAGAGATCATATACATGAAGGTGATCAACATGATCATCATATGAGTATGCAACAACAAGAAGAAGAACATAAATTTGCAAGGTCACACTCAACGGGGCATTCAATATTAATGATTAGAGGAGGTGAAGAAAGAGATGATGATAAATATACATTGATATTGCCTGAACATGTTATAAGGGCAGGACACTATTGTACGAGGAGTTGTGTAAGTTATCATGAGATAAGAATGGCAGAGACAGCACCTTGTAGTAATTGTGGTTTTGTTAATCCAAAATCTGACTCAACTTTACTTACTCAAGGTCAAGAGTCTTAA 906 0.4327 MSSAEPDYDVPPASAYSTPPTLVAFTLTVLILCFVAFSIVYLCKYCFSNVFHTWDLQRTASGTIIRPSPARSPPRGLDVTLLNRFPTFVYASVKNLRLKKSYSLECAICLTEFEDDSLLRLLTICCHVFHQECIDLWLRSHKTCPVCRTELDSPPNQTSKHGDDNSTRNAQEDTLSLPCDDIRIDVREEENGGVGEMTRDHIHEGDQHDHHMSMQQQEEEHKFARSHSTGHSILMIRGGEERDDDKYTLILPEHVIRAGHYCTRSCVSYHEIRMAETAPCSNCGFVNPKSDSTLLTQGQES 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01916 301 Pfam Ring finger domain 105 148 IPR001841 -
Car07g01916 301 PANTHER RING FINGER DOMAIN-CONTAINING 4 271 - -
Car07g01916 301 MobiDBLite consensus disorder prediction 150 172 - -
Car07g01916 301 CDD RING-H2_EL5_like 105 148 - -
Car07g01916 301 SUPERFAMILY RING/U-box 99 156 - -
Car07g01916 301 SMART ring_2 106 147 IPR001841 -
Car07g01916 301 MobiDBLite consensus disorder prediction 149 172 - -
Car07g01916 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 154 IPR013083 -
Car07g01916 301 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Car07g01916 301 PANTHER RING-H2 FINGER PROTEIN ATL29 4 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01916 Car-Chr7 21903952 21904857 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01916 1 284 C3H Transcription Factor Family AT2G35420 33.218 1.31e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01916 - - gmx:100815505 333.569