Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01914 ATGGCTTTAGAAACTCTTTCATCATCTAATAATGATTTTTCAAACTTCATTATCTATGACACAATTTCAGCAACTCCATTTAGTACTACAACAACAGAGTCTCATAATAATATTTGTTTCTTGGAAAATAGAATGAACAATGAGCTTGCATTTGATCATAACAACAATAACTATGATGTGATGATGAAGAATAGAAAACGGCAATGTTCaagagagaatgaagaagaagaagaagaagaaagaaTTGGAAATAGCAAACAAATGGTGCAAGGGAGAAAAAAGAGGAGAAGGAAACCAAGAGTTTGTAAGAACAAAGAAGAGGCAGAGACACAGAGAATCACTCACATTACTGTTGAGAGAAATCGTAGGAAACAGATGAATGAACATCTTGCTGTTCTTCGTTCACTCATGCCTGAATCTTATGTCCAAAGGGGTGACCAAGCCTCAATAGTAGGAGGGGCCATAGAGTTTGTAAAGGAGCTAGAACACCTCTTACAATCACTTGAAGCTAAAAAGCTACAACTATTACAACAAGAAGTAGCACAAAGCAATGAAGATGACACATCCATTTCAAAACTCATGATAAGACCACCTTTTGCACAATTTTTTGTGTATCCTCAATACACATGGTCCCAAAATCCTAACAAATACACATCAAAGACCAAAGCTGCCATAGCTGATATCGAGGTTACATTAATCGAGACTCATGCAAATCTTAGAATCCTCACTAGGAGAAGAACAGGACAACTAACAAAATTGGTGGCTGGTTTTCAAACACTCTTCCTCACTATCCTTCATCTCAATGTCACTACCATTGACCCTTTGGTATTCTACTCTATTAGTGCCAAGGTTGAAGAAGGATTCCAACTTGGTTCAGTAGACGGTATTGCAACAGCAGTTCATCACATACTTGGAAGAATTGAGGAAGAAACTTCACTTTGCTGTTAA 948 0.3586 MALETLSSSNNDFSNFIIYDTISATPFSTTTTESHNNICFLENRMNNELAFDHNNNNYDVMMKNRKRQCSRENEEEEEEERIGNSKQMVQGRKKRRRKPRVCKNKEEAETQRITHITVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEHLLQSLEAKKLQLLQQEVAQSNEDDTSISKLMIRPPFAQFFVYPQYTWSQNPNKYTSKTKAAIADIEVTLIETHANLRILTRRRTGQLTKLVAGFQTLFLTILHLNVTTIDPLVFYSISAKVEEGFQLGSVDGIATAVHHILGRIEEETSLCC 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01914 315 SMART finulus 116 167 IPR011598 GO:0046983
Car07g01914 315 MobiDBLite consensus disorder prediction 72 87 - -
Car07g01914 315 Coils Coil 158 178 - -
Car07g01914 315 Gene3D - 102 179 IPR036638 GO:0046983
Car07g01914 315 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 109 178 IPR036638 GO:0046983
Car07g01914 315 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 110 161 IPR011598 GO:0046983
Car07g01914 315 PANTHER TRANSCRIPTION FACTOR BHLH71 1 314 - -
Car07g01914 315 CDD bHLH_AtFAMA_like 113 172 - -
Car07g01914 315 MobiDBLite consensus disorder prediction 72 108 - -
Car07g01914 315 Pfam Helix-loop-helix DNA-binding domain 111 162 IPR011598 GO:0046983
Car07g01914 315 PANTHER MAX DIMERIZATION, MAD 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01914 Car-Chr7 21857752 21861394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01914 102 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 56.522 5.04e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car07g01914 HLH 5.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01914 - - pvu:PHAVU_003G284500g 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01914 07 21857752 21861394 Car07g01914 07 21857752 21861394 ECH