Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01913 ATGTCTCCTCTTCAATATCCAAAAACTTGGATTCCCTATGAAAATACCAAAGACTGTTCACAAGGATTTTGCAGCATCTACTGTCCACAATGGTGCTACATAGTTTACAGTTACACTCCTCCACCACCATCTCTTCAATACCATGATAATGATTCAAAATCAAATGTCTCTCCTCTTGTTATTTCATTCCTTGGAATCTTAGCCACTGCTTTTCTACTACTAAGTTACTATACTCTCATATCCAAATACTGTGGTCACAGAGTATCTACAAGAAGAAATAGCACTGACCCAGTTGATGATTCGCAACGAAATCGCCGCGAAAACCATCAAGTTTCAAACTTTGGCCTAGATGAGGCTCTAATAAAGTCCATGGCAGTTTTCAAGTACAAAAAAAGAGAAACTTTTGTTGGTGTAAGTGATTGTTCTGTTTGTTTAAGTGAGTTTCAAGATGATGAAAGTGTTAGAATATTACCAAATTGTAACCATGTTTTTCATGTTTCTTGTATTGATAAATGGTTAAAATCTAACTCTAGTTGTCCTCTATGTCGTTCTAACATATTCACTTTGAATAATGTTTCAACATTTGAAGTTCAAGATGTAGTTATAGAACTTCCTTTGAGAAATGAAACTTTTTCACAAGATGAACAAATAGTTGTTGGAAGTGGGAATGAATTAAGGGGGGTGGAAATAGCAATGATGATGAATCATGGTGGTGGTGatTCTTATGAAGAAGGGTGTTCAATGGATGTAGTTGGTTCATCTAAGAGATTAAGAGGTGAAAGTAACAAGTCAAGGTACAAAAGAAGGATGTTGCATTGTGTTATGAGTCCAATTGCAATGAAGAGATCGTTTTCAAATGGAAGATTCTCATTTAGCAAAAGAAAAATTAGGCAGGGTATTATGCCTCTATGA 912 0.3531 MSPLQYPKTWIPYENTKDCSQGFCSIYCPQWCYIVYSYTPPPPSLQYHDNDSKSNVSPLVISFLGILATAFLLLSYYTLISKYCGHRVSTRRNSTDPVDDSQRNRRENHQVSNFGLDEALIKSMAVFKYKKRETFVGVSDCSVCLSEFQDDESVRILPNCNHVFHVSCIDKWLKSNSSCPLCRSNIFTLNNVSTFEVQDVVIELPLRNETFSQDEQIVVGSGNELRGVEIAMMMNHGGGDSYEEGCSMDVVGSSKRLRGESNKSRYKRRMLHCVMSPIAMKRSFSNGRFSFSKRKIRQGIMPL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01913 303 SMART ring_2 141 182 IPR001841 -
Car07g01913 303 CDD RING-H2_PA-TM-RING 140 183 - -
Car07g01913 303 SUPERFAMILY RING/U-box 122 189 - -
Car07g01913 303 Pfam Ring finger domain 140 183 IPR001841 -
Car07g01913 303 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 4 295 IPR044675 -
Car07g01913 303 ProSiteProfiles Zinc finger RING-type profile. 141 183 IPR001841 -
Car07g01913 303 PANTHER RING-H2 FINGER PROTEIN ATL53-RELATED 4 295 - -
Car07g01913 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 191 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01913 Car-Chr7 21842528 21843790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01913 7 219 C3H Transcription Factor Family AT3G03550 46.667 4.15e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01913 - - cam:101507968 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01913 07 21842528 21843790 Car07g01913 07 21842528 21843790 ECH
Car08g00947 08 8708074 8709845 Car07g01913 07 21842528 21843790 PCT