Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01906 ATGGCTTCCGATCCCTCCACCGATAAGAATATCGTCTTCAAAAAACTCAAGACGAAGTCTGAAAATAAGATATGTTTTGATTGCAATGCGAAGAATCCAACCTGGGCATCTGTTACATATGGGATCTTCCTATGCATTGATTGCTCTGCCGTTCATCGAAGTCTCGGCGTTCACATCAGCTTCGTGAGATCTACCAACTTAGACTCATGGACTCCTGAGCAACTAAAAATAATGATCTTTGGAGGAAACAATCGTGCACAGACTTTCTTTAAGCAACATGGTTGGACCGATGGTGGTAAAATAGAAGCAAAGTATACATCTAGAGCTGCAGAATTGTACAGGCAAATTCTTTCAAAGGAAGTAGCTAAAAGTATGGCCGAGGAGGTATGCTTGCCTTCATCACCTGTTGCTTCTCAGTCTGCTAATGGACTTCCTGATATCAGGACCAATGAGGCTCTGAAAGAAAACACTTCGGAGAAGGCAGAAAAGCCTGAGAGCACTTCTTCACCTAGAGCCTCGCACACAGTAGTATCAAATAATTTGAAGAAGCCTATTGGAGGTAAAAAGCCTGGGAAGAGTGGGGGACTTGGTGCACGTAAGCTCAATAAAAAGCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAAGAACCACCTGCACCGGCGGTTCCATCCACGACAAACAACAACTTGTCTGCCAAGCCTTCTCTGACATCTCGTTTTGAGTATGTAGATAATGTTCAATCACCTGAATTGAACTCTGGAGGTTCAAATGTATTCAATCACGTTTCTGCACCAAAGTCATCAAGCTTCTTTGCAGACTTTGGAATGGATAGTGGTTTCCCTAAGAAATTTGGGTCAAGCTCCTCAAAAGTGCAAATTGAGGAATCTGATGAAGCAAGAAAGAAGTTCTCAAATGCTAAATCTATTTCGTCATCTCAATTTTTTGGAGACCAGAACAAGGCGGGAGATGCTGATACTCGAGCTACTTTGTCAAAGTTTTCAAGTTCAACTGCCATATCCAGTGCTGATCTTTTTGGTGACTCTGGAGATTCCTCCATTGATCTTGCTGCTAGCGATCTCATCAATCGATTATCTTTTCAGGCACAACAGGATATCTCCTCCCTTAAGAACATTGCAGGAGAGACTGGGAAAAAGTTCTCCTCCTTTGCATCCTCCTTGATGACAGATCTTCAAGATCGAATTCTCTGA 1209 0.4285 MASDPSTDKNIVFKKLKTKSENKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKIMIFGGNNRAQTFFKQHGWTDGGKIEAKYTSRAAELYRQILSKEVAKSMAEEVCLPSSPVASQSANGLPDIRTNEALKENTSEKAEKPESTSSPRASHTVVSNNLKKPIGGKKPGKSGGLGARKLNKKPSESLYEQKPEEPPAPAVPSTTNNNLSAKPSLTSRFEYVDNVQSPELNSGGSNVFNHVSAPKSSSFFADFGMDSGFPKKFGSSSSKVQIEESDEARKKFSNAKSISSSQFFGDQNKAGDADTRATLSKFSSSTAISSADLFGDSGDSSIDLAASDLINRLSFQAQQDISSLKNIAGETGKKFSSFASSLMTDLQDRIL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01906 402 SUPERFAMILY ArfGap/RecO-like zinc finger 12 125 IPR037278 -
Car07g01906 402 MobiDBLite consensus disorder prediction 153 167 - -
Car07g01906 402 CDD ArfGap_ArfGap2_3_like 8 123 - -
Car07g01906 402 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Car07g01906 402 Gene3D Arf GTPase activating protein 1 138 IPR038508 -
Car07g01906 402 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 402 - -
Car07g01906 402 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 402 - -
Car07g01906 402 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Car07g01906 402 Pfam Putative GTPase activating protein for Arf 12 106 IPR001164 GO:0005096
Car07g01906 402 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Car07g01906 402 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Car07g01906 402 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Car07g01906 402 MobiDBLite consensus disorder prediction 153 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01906 Car-Chr7 21584478 21589584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01906 13 91 C2H2 Transcription Factor Family AT4G21160 46.250 3.26e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01906 K12493 K11855 gmx:100789796 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01906 07 21584478 21589584 Car07g01906 07 21584478 21589584 ECH