Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01890 ATGGCGATCAATAACTCATCAAAGACTCAAATTCTTTTCATTACCATAATTTCCTTCCTAATTTTGGCTCAAAATGTAAACTCAGCTTCATTTGCTTTCTCTAATTTCGGGCCATACACAAACAACATTCAACTTGAAGGCAATGCCTTCACTTCAAACGGGTCCATCTATCTCACAAATGCTTTCGTCCCAAATAGCGCTGGTAGAGCCTCTTATGCTGCACCAGTGCATCTTTGGGACGCAGAAACTGGTAATCTCGCGGAATTCAGTTCCGTTTTCTCTTTTGTAGTTGCACCAAGCGGCCCTGGACTTTTTGGAGATGGAATCTCCTTCTTCCTTGCGCCATTCAACTCACACATACCTAAAAATTCAAGTGGTGGATTCCTTGGACTATTCAACGCCGAAACCGCTTTGAATTCCTACCAAAATCAAATAGTTGCCGTCGAACTCGATTCCTTCGGAGGAAATTCTTGGGATCCTGTTTATCCTCATGTTGGCATTGATGTAAACTCTATTGCGTCGGTAACAACAACGCCGTGGAATACCGGAAGTGTTGTTAATAAATTCACTGGATTTGCTTTTGTGAATTATGAGCCTGTGACAAAAAATTTAAGTGTTGTTGTAAGATACCCTGAAAGCTATAGTGTGAATGGGACTTCAAGTAGTGTTTCATTTGTGATTGATTTGAGGACTGTGTTACCTGAATGGGTTAGAGTTGGATTCTCTGGTGCCACTGGACAACTAGTTGAATTGCACAAGATTCTTTCTTGGAGTTTTAGATCAAGCTTCTAG 792 0.4104 MAINNSSKTQILFITIISFLILAQNVNSASFAFSNFGPYTNNIQLEGNAFTSNGSIYLTNAFVPNSAGRASYAAPVHLWDAETGNLAEFSSVFSFVVAPSGPGLFGDGISFFLAPFNSHIPKNSSGGFLGLFNAETALNSYQNQIVAVELDSFGGNSWDPVYPHVGIDVNSIASVTTTPWNTGSVVNKFTGFAFVNYEPVTKNLSVVVRYPESYSVNGTSSSVSFVIDLRTVLPEWVRVGFSGATGQLVELHKILSWSFRSSF 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01890 263 ProSitePatterns Legume lectins alpha-chain signature. 233 242 IPR000985 -
Car07g01890 263 Gene3D - 26 263 - -
Car07g01890 263 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 263 IPR013320 -
Car07g01890 263 ProSiteProfiles DOMON domain profile. 208 263 IPR005018 -
Car07g01890 263 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 8 262 - -
Car07g01890 263 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Car07g01890 263 PANTHER LECTIN 8 262 - -
Car07g01890 263 CDD lectin_legume_LecRK_Arcelin_ConA 30 263 IPR001220 GO:0030246
Car07g01890 263 PIRSF Plant_L_lectin 3 263 IPR016363 GO:0030246
Car07g01890 263 Pfam Legume lectin domain 29 262 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01890 Car-Chr7 21293361 21294376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01890 14 263 Receptor kinase-like Gene Family AT5G10530 40.157 1.15e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01890 - - aprc:113871630 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01890 07 21293361 21294376 Car08g00984 08 9214732 9215774 PCT