Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01889 ATGGCAATGTATAATCAAACCAAAAACACTTTATTTTCCATGTTAATCATACTTTTCACTCTGTTCTATGCACTCTTCAACCCTGCATACTCAATTTCCTTCAACTTCTCAAACTTCCAACCAAATTTATATCTAATAAATTTCCAAGGTGATGCATTTTCCTCAAATGGTGTTCTTCAGCTCACAAAAAACCAACTTGATGGCCCCATTACAAGCAGTGTCGGTCGCGCTTCTTTCGATCAACCAGTGAAGCTTTATGATCAAGAAACAAAAAAGTTAACTGATTTCACAACCCATTTCTCTTTTGTCATGAAAGCTGTTGTTAAAACACAGTTTGGCGACGGTTTATCTTTTTTCATGGCGCCTTTTCAATCCGATATCCCGAAGAATTCATCAGGTGGTTACCTTGGTTTGTTTGACATGGATTCTGCTTTCAACACTAGTAAGAATCAAATAGTAGCTGTTGAGTTTGATAGTTTTAAGAATGATTGGGATCCTAGCTCTGATCATGTTGGAATCAACGTTAATTCGATCGAATCTGTCGAAAATGTTACTTGGAAGAGTAATATTAAAAATGGGTCAGTTGCTAATGCTTGGATTTCATATAACTCTACCACAAAAAACCTTTCTGTTTTTCTTACTTATGCTAATAATCCAACTTTTCATGGAAACTCTAGTCTTTCATATGTGATTGATTTGAGGGATGTTTTGCCGGAATATGTTAGGATCGGTTTTTCGGCCGCTACTGGTGAATGGATTGAAATACACAACATTTTATCTTGGTCATTCAATTCAAATTTGGAGAGTGGAAGTGGTAGGAACATCAAGAttggtttaggtgttggtttaagtgttggttttggttctttaacttgttttgttggtgttttgtggttCACTTTTTGGAGAAAAAGAAAGGGTCTAATTGATAATAATAGAGGTATTGATGCTTCTATTGATGATGATGAATTTGAGAGAGGAACTGGTCCAAAAAGGTTTAGTTACAAAGAACTAAGCAATGCAACAAATGATTTTGATGAAAAAGGAAAACTTGGAGAAGGAGGGTTTGGAGGTGTTTATAAAGGTTTACTTGGAAGCAAAAACAACAAAATAGAAGTGGCTGTTAAAAGGGTTTCAAAAGGGTCAAGACAAGGGAAAAAAGAATACATATCAGAAGTAAGAATAATAAGCAAACTAAGACATAGAAATTTGGTTCAACTCTTTGGTTGGTGTCATGAAAAAAATGAGCTTTTACTTGTTTATGAATACATGCCTAATGGAAGCCTTGATTTTCATCTATTTGGAAAAGGGGTTGTGCTTACTTGGACAACAAGGTACAAAATAGCTTTAGGTTTGGCATCATCACTTCTTTATTTGCATGAAGAGTGGGAACAATGTGTAGTTCATAGAGATATTAAGTCAAGTAATGTAATGTTAGATGCAAATTTCAATGCTAAACTTGGTGATTTTGGTCTAGCTCGGTTAGTGGATCATGAACTTGGTTCTCAGACGACTGTTTTGGCAGGTACAATGGGGTACTTAGCACCAGAGTGTGTAACAACAGGGAAATCAAGTAAAGAGTCAGATGTTTATAGCTTTGGCGTTGTTGCACTCGAAATCACATGTGGTAGAAGACCAGTTGAAGTGAAAGAAGAGGTTAAGAAAGTTAGGCTTGTGGAGTGGATTTGGGAACTATATGGTCAAGGGAAATTAAATGAAGGTGTTGATAAAGGGTTATTAAATTTGGAATTTGATGAAAAGCAAATGGAGTATTTGATGGTTGTTGGGTTGTGGTGTTGTCACCCTGATTATACTATGAGACCTTCTATAAGACAAGTTATAAATGTTCTTAATTTTGAAGCTACTTTGCCTAGTCTTCCATCAAAATTGCCTGTGCCTATGTATTATGCACCTCCTATGGAAATGTGTAGATTTTCATATACTTCAAATGGACTCACAAATACAACTAAAGGGTCATCCACTTATTCATCAATGTCAGCAGGGTCTAGAAAATCTTTGTTGTAG 2025 0.3462 MAMYNQTKNTLFSMLIILFTLFYALFNPAYSISFNFSNFQPNLYLINFQGDAFSSNGVLQLTKNQLDGPITSSVGRASFDQPVKLYDQETKKLTDFTTHFSFVMKAVVKTQFGDGLSFFMAPFQSDIPKNSSGGYLGLFDMDSAFNTSKNQIVAVEFDSFKNDWDPSSDHVGINVNSIESVENVTWKSNIKNGSVANAWISYNSTTKNLSVFLTYANNPTFHGNSSLSYVIDLRDVLPEYVRIGFSAATGEWIEIHNILSWSFNSNLESGSGRNIKIGLGVGLSVGFGSLTCFVGVLWFTFWRKRKGLIDNNRGIDASIDDDEFERGTGPKRFSYKELSNATNDFDEKGKLGEGGFGGVYKGLLGSKNNKIEVAVKRVSKGSRQGKKEYISEVRIISKLRHRNLVQLFGWCHEKNELLLVYEYMPNGSLDFHLFGKGVVLTWTTRYKIALGLASSLLYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRRPVEVKEEVKKVRLVEWIWELYGQGKLNEGVDKGLLNLEFDEKQMEYLMVVGLWCCHPDYTMRPSIRQVINVLNFEATLPSLPSKLPVPMYYAPPMEMCRFSYTSNGLTNTTKGSSTYSSMSAGSRKSLL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01889 674 ProSitePatterns Protein kinases ATP-binding region signature. 351 376 IPR017441 GO:0005524
Car07g01889 674 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 22 672 - -
Car07g01889 674 SMART serkin_6 345 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01889 674 Gene3D Phosphorylase Kinase; domain 1 330 423 - -
Car07g01889 674 ProSiteProfiles Protein kinase domain profile. 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01889 674 ProSitePatterns Legume lectins alpha-chain signature. 237 246 IPR000985 -
Car07g01889 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 269 IPR013320 -
Car07g01889 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Car07g01889 674 Pfam Protein kinase domain 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01889 674 Gene3D - 30 276 - -
Car07g01889 674 CDD STKc_IRAK 359 618 - -
Car07g01889 674 CDD lectin_legume_LecRK_Arcelin_ConA 32 267 IPR001220 GO:0030246
Car07g01889 674 SUPERFAMILY Protein kinase-like (PK-like) 328 619 IPR011009 -
Car07g01889 674 PANTHER - 22 672 - -
Car07g01889 674 Pfam Legume lectin domain 32 268 IPR001220 GO:0030246
Car07g01889 674 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Car07g01889 674 Gene3D Transferase(Phosphotransferase) domain 1 424 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01889 Car-Chr7 21286949 21289062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01889 16 636 Receptor kinase-like Gene Family AT5G10530 51.108 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car07g01889 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01889 - - gmx:100777201 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00984 08 9214732 9215774 Car07g01889 07 21286949 21289062 PCT
Car07g01889 07 21286949 21289062 Car08g00985 08 9217266 9218333 PCT