Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01882 ATGGAGAGATTAGAGAGAAGGAGCAAGAAGGATCAAGAAAAGAAATCAAAAAACTCAAAAGTTGTGGAAATAACGAATAAAAATAGTATTAAGAAAGACTTTTTCTATGCATATGATGAAGAGATATCAGCAGCAGGTTCGCCAATACAATCACCAAGAGATGTATTTGACGTACCGATATCAGGCACGGATTCTGATAGCACAGGAAGCAGCAGCAGTTCGAGTTCGACGCCGCAACGGGTGCAAAATGGTGGGAGGTCATCCGGAGGAGGAGTGGTTGAAGGTGGACACCAATGGAGGAATATGATTGATGCATTGAGGATTAAATCTGTGAGGAGATTTTCTTCCATTCCTTTGCTTGCTGCTAGCTATGAAATTTCTAGGAAGAATTTGAGGAATAAGTTGGCTAGAGTAAGAACAGATAATGATGATGAGAATGGTTTTGATTGTTCTCTTGACCTTGATGGTATTCCTACTAAGCCTACTTGGAGAAATTTTAGTTATGAAGATCTTGTAGCTGCAACTGACAATTTCAATCCTGAGAACATGATTGGAAAAGGTGGTCATGCAGAAGTGTACAAAGCATGTTTACCAGATGGTAAAGTTGTGGCAGTAAAAAGACTAATGAGAAATGAAAAAGAAGCTGGAGACAAAGCTGGTGATTTCTTATCAGAGCTTGGGATTATTGCTCACATTAACCACCCAAATGCAACACGCCTCATCGGTTTCGGAATCGACCGGGGCCTCTACTTTGTTCTTCAATTCGCTTCGCATGGAAGCCTTTCCTCTTTGCTCTTTGGTTCCGAATGTTTGGAATGGAAAATAAGGTTCAAGGTAGCACTTGGGGTAGCAAAAGGTTTGCAATATCTCCATCAAGATTGTCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAACATATTACTCAACCATAATGGTGAAGCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTTCCAGATAAATGGGCACACCATGTTGTGTTTCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTATTTCATGCATGGACTTGTGGATGAAAAAACTGATGTTTTTGCATTTGGGGTATTGTTACTTGAGCTCATGACAGGTCGTCGTGCAGTTGATTCTAATAGTAGGCAAAGTCTTGTGATTTGGGCTAAACCACTATTGGATGCAAAGCAGGTGAAGGAAATAGCAGACCCAAGATTAGAAGATCAATATGATCCAATTGAAATGATGTGTGCCATGGCAACAGCTTCCATGTGTATCCACCACGTGTCCTCCAAAAGGCCATACATGAATCAGGTTGTGCTACTGCTAAAAGGTGAAGAGGTAGCTGTGGACCTAACTCAAAAATCAATAGCTCCAAGGTCACTCTTGCTAGATGCTTGTGATTTAGAAGACTATACGTGTTCAAATTATTTGAATGATCTCAATCGTCACAAGCAATTAATCATGGAGTGA 1479 0.407 MERLERRSKKDQEKKSKNSKVVEITNKNSIKKDFFYAYDEEISAAGSPIQSPRDVFDVPISGTDSDSTGSSSSSSSTPQRVQNGGRSSGGGVVEGGHQWRNMIDALRIKSVRRFSSIPLLAASYEISRKNLRNKLARVRTDNDDENGFDCSLDLDGIPTKPTWRNFSYEDLVAATDNFNPENMIGKGGHAEVYKACLPDGKVVAVKRLMRNEKEAGDKAGDFLSELGIIAHINHPNATRLIGFGIDRGLYFVLQFASHGSLSSLLFGSECLEWKIRFKVALGVAKGLQYLHQDCPRRIIHRDIKASNILLNHNGEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAFGVLLLELMTGRRAVDSNSRQSLVIWAKPLLDAKQVKEIADPRLEDQYDPIEMMCAMATASMCIHHVSSKRPYMNQVVLLLKGEEVAVDLTQKSIAPRSLLLDACDLEDYTCSNYLNDLNRHKQLIME 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01882 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Car07g01882 492 ProSiteProfiles Protein kinase domain profile. 178 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01882 492 Coils Coil 121 141 - -
Car07g01882 492 SUPERFAMILY Protein kinase-like (PK-like) 162 448 IPR011009 -
Car07g01882 492 Gene3D Phosphorylase Kinase; domain 1 154 253 - -
Car07g01882 492 PANTHER OS08G0249100 PROTEIN 1 492 - -
Car07g01882 492 Gene3D Transferase(Phosphotransferase) domain 1 257 459 - -
Car07g01882 492 MobiDBLite consensus disorder prediction 61 86 - -
Car07g01882 492 SMART serkin_6 178 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01882 492 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 492 - -
Car07g01882 492 ProSitePatterns Protein kinases ATP-binding region signature. 184 206 IPR017441 GO:0005524
Car07g01882 492 MobiDBLite consensus disorder prediction 1 21 - -
Car07g01882 492 MobiDBLite consensus disorder prediction 47 96 - -
Car07g01882 492 Pfam Protein kinase domain 181 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01882 Car-Chr7 21148541 21152483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01882 166 441 Trihelix Transcription Factor Family AT1G68690 45.105 3.73e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Car07g01882 Pkinase 4.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01882 - - gmx:100812793 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01004 08 9434844 9440173 Car07g01882 07 21148541 21152483 PCT