Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01879 ATGGATGCAACTCAAACTAACAAAATTTACGTTGCGGTAGGCTATGATGTGTTAGATGGATTTCAAACATTGGATTGGGCTTTGAAGAAATGGAATTCTCATCCAAATATTTCTATAATCATTTTACATGTGAAATACAACCCTTCCAAAGATCATGTTTATACTCTCCTTGGAAAACTCCCTGCAAAAGGTGCATGTGAAGAGAAATTAGATTGTATAAGGAAATATGAGCAAAACATAATCAACAAATTGCTTTCCAAGTATATAGCTTTATGTGACAAAATTCCAGCTGAAACATTTGAGGTTGAGAGATTTGATGAACCAATGCAGAATCTCACATTAGACTTGATTCTTGGTCTAGGAATAACCAAATTGGTCATGGGATTTTCATTCATGAGACCTTCTATAAAATCAAAAGATGCCATGAACGGATTGTTCTATGTTCATCAGCACAAGCCTGACTTCTGTGAATTATTCATAATATGTGGAGGGAAACAAGTTTCACCAAGAGTGAAGAATGGTGAAATAACCATGGAGGATGATAATGGTGTCAAGGTTGCCAAAATGAGAGATAAGATGAGTTTCAAAGATTGGCTAGAGAGAATGATAAGCGATAAAACCATTGATTCCAACCACAAGAATTCTAGTAGGTCACCAATTTCCTCAACATATTTGGAGGCTCATCTAGAACAAAATTATATCCAAGAAATTGAAAATTATTTACATGAGTTAGTGTCCTTAAATTTCGAGGAAGGAAGTTTTGGACAAGACAATCATGATTCCTTCGTTACTCCAATTGAGCCTTATTTCCAAAAACTTCAAATTTCTGATAATAAGAGTGCTGCAGAAAAATTTGAGATCCTCACAGATAAACTGAATGAAGCTTACAATACCATCCAAGTGAAAAGAAAAGAAGAAAAGGACAATTTGGAGAAGCATGCAAAAGCTGAATGGGCTATTTATATATGCAATCGTCGGGAAGAAGAAGTTGAATATTTAAAAAGTGAAGAATTGACAAGAAAGGACGAGCTAAAGAAGGAAGTGAATGCAGAAAATGAAAAAATTAACAAAATTAGGATGAGTGTTGAAGAGAGCAAGCAAAGGCTTCATTCACTAAAAGAGCTACAACTAGAGCTTCAAAATAAGCTTCATGTTTCCAAATTGAAATTTTCAGAATTTGAAACCAAACTAGAGAAAGTAAATGCTGCAAGGAATGAGATGCTAATGAAAATTGAAGAGCTAAGTAGACAAAGGGATATTATGAACAAATGGATTATGTTTATCAAAGAAAAAAATGTCACAAAAATTAGTACTAAGGTAATAGAGAATGAATGTGGTTTAAGAGAGTACACAAAGGAGGATATTATTTTGGCCACTCACAATTTTTCAGAACACTTGAGGTTGAAATCTTGTGAGAATTGGAGTAATGTCTTTAGAGGGTATATTGACCATTCCAATGCTGCAATCAAGATGCTTGATTCTACTCTTGGCTTGTCCCAACAAGATTTCCAAGCTAAGTTGAGGTCTCTTGGTAGTATTTGGCATCCTCATCTTGTTGCTGTATTGGGCTTCTGTTCTGAGCCCAAATGCTTAGTTTTGGAATACATGCACAATGGCAGCTTGGAAGACATACTACTTTGCAAGACAAGAATCAGGCCCATTAGCTGGCAAGATCGCATAAGGATAGCCATAGAAGTTTGTTCTGGGATGGGCTTTCTCAATGCATTTAAGCCCAGGCCCATTATTCATTGTCATCCTTCTCCATCCAACATCCTCCTAGACTACAATTTTGTTGCAAAGATCAAAGGGTTTGGGCTTCATGGGTGCAATAAAGAATGTGATGTTGGGTTAGATATGAAGGCAATAGGGGTTTTGTTGCTTCATCTTTTGACTGGAAGAGGAAATTTGGTGAAAGTGGATAAGGAAGCAATTTTTGATGAGATTGGTGAAGAATGGCCATTGGATGTAGCAAGAGAAGTTTTGGGCTTGGCAATGAGGTGCATGACCATGAATTGTGAGTCTAATCTAGAAATGAGCATAACAAGAGTGATGGAGGAACTCAATGAGATAAAAAAAAAGGGGTGGTGA 2088 0.3625 MDATQTNKIYVAVGYDVLDGFQTLDWALKKWNSHPNISIIILHVKYNPSKDHVYTLLGKLPAKGACEEKLDCIRKYEQNIINKLLSKYIALCDKIPAETFEVERFDEPMQNLTLDLILGLGITKLVMGFSFMRPSIKSKDAMNGLFYVHQHKPDFCELFIICGGKQVSPRVKNGEITMEDDNGVKVAKMRDKMSFKDWLERMISDKTIDSNHKNSSRSPISSTYLEAHLEQNYIQEIENYLHELVSLNFEEGSFGQDNHDSFVTPIEPYFQKLQISDNKSAAEKFEILTDKLNEAYNTIQVKRKEEKDNLEKHAKAEWAIYICNRREEEVEYLKSEELTRKDELKKEVNAENEKINKIRMSVEESKQRLHSLKELQLELQNKLHVSKLKFSEFETKLEKVNAARNEMLMKIEELSRQRDIMNKWIMFIKEKNVTKISTKVIENECGLREYTKEDIILATHNFSEHLRLKSCENWSNVFRGYIDHSNAAIKMLDSTLGLSQQDFQAKLRSLGSIWHPHLVAVLGFCSEPKCLVLEYMHNGSLEDILLCKTRIRPISWQDRIRIAIEVCSGMGFLNAFKPRPIIHCHPSPSNILLDYNFVAKIKGFGLHGCNKECDVGLDMKAIGVLLLHLLTGRGNLVKVDKEAIFDEIGEEWPLDVAREVLGLAMRCMTMNCESNLEMSITRVMEELNEIKKKGW 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01879 695 Coils Coil 334 382 - -
Car07g01879 695 PANTHER U-BOX KINASE FAMILY PROTEIN 5 694 - -
Car07g01879 695 Coils Coil 397 417 - -
Car07g01879 695 ProSiteProfiles Protein kinase domain profile. 463 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01879 695 Gene3D Phosphorylase Kinase; domain 1 422 535 - -
Car07g01879 695 Gene3D Transferase(Phosphotransferase) domain 1 544 692 - -
Car07g01879 695 PANTHER OS02G0152300 PROTEIN 5 694 - -
Car07g01879 695 SUPERFAMILY Protein kinase-like (PK-like) 451 678 IPR011009 -
Car07g01879 695 Pfam Protein tyrosine and serine/threonine kinase 476 607 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01879 Car-Chr7 21116169 21122638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01879 3 694 U-box Gene Family AT5G65500 42.475 2.31e-170 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Car07g01879 PK_Tyr_Ser-Thr 2.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01879 - - cam:101501543 995.727