Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01876 ATGGATAGTACACTTTCCAGCGGAGTAGAGTTAGGCGATGTTgaagagagaagagaagcacaggaattagaagatgaagaaAGCTTCGCATACGCTATGCAACTTTGCAATTCGATTGTGTTACCAATGACACTTCAATCTGCAATTGATCTTGGCGTATTCGATGTGTTGCAAAAAGCCGGTGAAGGTGCTCAACTATCTGCCCATGAAATTGCTTCTCGCATTTCCTGCAACAATCCTGATGCTCCTAAAATGTTAGATCGGATCCTTGCTCTTCTTGCTTCTCACTCGGTGCTTAAATGTTTGGTAATTCAAGATGAAGAAAAGCTTGGATCCTTTCATAGACTTTATACTATGTCTCCTGTTGCCAAATTCTTGGTTCCTAATTCTGATGGTGTTTCATTAGGACCCTTGTTGTCTTTGATTCAAGATAAGGTCTTCTTAGCTAGCTGGCCTGAGCTTAAAAATGCAATTAAAGAAGGAGGTATTCCATTCAACAGGGTTTATGGATCACATGCCTTTGAATATCCAAGCATGGACTCGAGGTTCAACCAAATTTTCAATACAGCTATGATCAATCACACCAAAATAATCATGACGAAGGTTATTGAGACCTACAAAGGTTTTGAAGTCATAAATAAGCTTGTGGATGTTGGAGGTGGTCTTGGGGTTAACATTAATTTGGTGACTTCCAAATACCCTCATATAAAGGGTATCAATTTTGACTTACCTCATGTCTTACAACACGCCCCTTCTTATCCTGGTGTGGAACATGTTGGTGGAGATATGTTTGAAAGTGTGCCTAAAGGAGATGCCATCTTTATGAAGTGGATACTTCATGATTGGAGCGATGAGCATTGCTTGAAGCTATTGAAGAATTGCTATGATGCTATCCCTGATGATGGGAAAGTGATTGTTCTGGAGTCACTTCTTCCTATTATACCTGACAATAGTAATGCTACAAAGACTATCTCACAATTAGATGTTCTAATGATGACTCAAAACCCAGGAGGAAAAGAGAGAACTAAGCAAGAATTTGTGGATTTGGCAACTAAAGCTGGATTTAGTGGCATCAAATATGATTGTTGTGTCCGTAACTTTTGGGTTATGGAGTTCTTTAAGTAA 1125 0.3796 MDSTLSSGVELGDVEERREAQELEDEESFAYAMQLCNSIVLPMTLQSAIDLGVFDVLQKAGEGAQLSAHEIASRISCNNPDAPKMLDRILALLASHSVLKCLVIQDEEKLGSFHRLYTMSPVAKFLVPNSDGVSLGPLLSLIQDKVFLASWPELKNAIKEGGIPFNRVYGSHAFEYPSMDSRFNQIFNTAMINHTKIIMTKVIETYKGFEVINKLVDVGGGLGVNINLVTSKYPHIKGINFDLPHVLQHAPSYPGVEHVGGDMFESVPKGDAIFMKWILHDWSDEHCLKLLKNCYDAIPDDGKVIVLESLLPIIPDNSNATKTISQLDVLMMTQNPGGKERTKQEFVDLATKAGFSGIKYDCCVRNFWVMEFFK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01876 374 Pfam O-methyltransferase domain 151 356 IPR001077 GO:0008171
Car07g01876 374 Gene3D Vaccinia Virus protein VP39 128 374 IPR029063 -
Car07g01876 374 PANTHER O-METHYLTRANSFERASE 21 374 IPR016461 GO:0008168
Car07g01876 374 Pfam Dimerisation domain 43 94 IPR012967 GO:0046983
Car07g01876 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 372 IPR029063 -
Car07g01876 374 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 21 374 - -
Car07g01876 374 PIRSF O-mtase 12 374 IPR016461 GO:0008168
Car07g01876 374 Gene3D - 12 126 IPR036388 -
Car07g01876 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 374 IPR016461 GO:0008168
Car07g01876 374 SUPERFAMILY "Winged helix" DNA-binding domain 24 129 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01876 Car-Chr7 21094487 21099317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01876 14 374 Monolignol Biosynthesis Gene Families AT5G54160 52.893 2.45e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01876 K13066 - gmx:100803633 560.066