Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01859 ATGGAGCAGAACAATGACTCTGAAATATCAAGCCTTCTGTGCTTTGAAAACATCAAAACATGTCTTGATGATTTTGAAAGTGATGTTGATGATGGGTCTATTACTCCACCATCTAGGGACCACAAAAACCTTAACTTTAACAATCAAACTCTGTTTAATGACAACCTTGTTGGATCGGAAAACTTGGTTGGTTTTTTTGTACTTAATGATGAAATTGTTTGGTGTTTGGTTAAGAGAGAAAAAGAACAATTGCCTCGTTATGATTATCTCAATAGGCTTCGTGATGCTCAAATGaacatcaacttgatctccaatttcaacttcaacttGAGTGTTCATGAAGATTATGGTTTTGGACCCTGTAGCCTTTCTCTTGCTGTGAACTACCTGGATCGTTTCTTATCGGTATATGATTTGGAAAGAGACAAAGATTGGAGTGTGCAATTGTTGGCCTTAGCATGTTTGTCAATTGCTGCTAAAATGGAGGAGGGTCAGACTAAAGTGCCTGAATCTGCAGACATAATTGGAAAACCAAAGTTTATATTTGAAGCTAAGGGTATTCAAAGGATGGAATTATTGGTATTAAGCCATTTGAATTGGAAAATGCAATCTATAACTCCATGTTCCTTTGTCGATTACTTTCTCAGAAAGATGACTAACGACCCTTATCCCACCGATTCATCCATGCTGAGATCGTTGGAACTAATTCTCAGCATAACTAAATGTATTGATTTATTGGAATTCAAGCCTTCTGAAATTGCTGCAGCTGTTGCAATTTTTGTTTCAAAGGATTTGCAAGAAAGTGATATAAATCATACTTTGACTCGATTCGCTATTGTTGACAAGGACAAAATTTTGAAGTGTCTTGAAGTGATGAAAAATGTAAATTTGGCCAAAGTTTCACTTGATTTAGGAAGCGATTCAGAAGAATTTGAACCCGGAAGCCCTATAGGGGTGTTAGACGCTGCATGTGTAAGCTCTAAAAGTGATGGAATAACAGTTGAATCATCACATACAAATTCTACCCCTGAAAATCCAATTACAAAGAGGCTCAAATTCTTCCATGATGGAACTCTCTAG 1080 0.3565 MEQNNDSEISSLLCFENIKTCLDDFESDVDDGSITPPSRDHKNLNFNNQTLFNDNLVGSENLVGFFVLNDEIVWCLVKREKEQLPRYDYLNRLRDAQMNINLISNFNFNLSVHEDYGFGPCSLSLAVNYLDRFLSVYDLERDKDWSVQLLALACLSIAAKMEEGQTKVPESADIIGKPKFIFEAKGIQRMELLVLSHLNWKMQSITPCSFVDYFLRKMTNDPYPTDSSMLRSLELILSITKCIDLLEFKPSEIAAAVAIFVSKDLQESDINHTLTRFAIVDKDKILKCLEVMKNVNLAKVSLDLGSDSEEFEPGSPIGVLDAACVSSKSDGITVESSHTNSTPENPITKRLKFFHDGTL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01859 359 PANTHER CYCLINS 46 353 IPR039361 -
Car07g01859 359 Pfam Cyclin, N-terminal domain 71 202 IPR006671 -
Car07g01859 359 SMART Cyclin_C_2 205 328 IPR004367 -
Car07g01859 359 SUPERFAMILY Cyclin-like 62 202 IPR036915 -
Car07g01859 359 CDD CYCLIN 112 195 IPR013763 -
Car07g01859 359 PANTHER CYCLIN-D4-1-LIKE 46 353 - -
Car07g01859 359 SUPERFAMILY Cyclin-like 188 295 IPR036915 -
Car07g01859 359 Gene3D - 76 290 - -
Car07g01859 359 Gene3D - 86 203 - -
Car07g01859 359 Pfam Cyclin, C-terminal domain 205 295 IPR004367 -
Car07g01859 359 SMART cyclin_7 107 196 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01859 Car-Chr7 20735487 20737751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01859 69 266 Core Cell Cycle Gene Families AT5G65420 51.980 4.49e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01859 K18810 - gmx:100800570 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01027 08 9765988 9768565 Car07g01859 07 20735487 20737751 PCT