Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01852 ATGGAACAAGCACTCCGACGTCTCAACGGAATGTCTCCGACGGAACATCCAAACGACCACCTCACTTCCTACTCCGCCGTACCAACCAACAAGACCAGCGGTTCCCCCGCTGGCACAATACGATACCGCGGAGTCCGACGCCGACCGTGGGGCCGTTACGCTGCTGAAATAAGGGACCCACATTCAAAAGAACGCCGCTGGCTTGGAACATTCGACACAGCCGAAGAAGCCGCTTGCGCCTATGACTGCGCCGCCCGAGCCATGCGCGGAACCAAAGCCCGAACCAATTTTCTCTATCATCCCGAACCAACCGAAAATCAAAACCGTTTTCATCCCTTCAATATTCCTCAACACCTCCACGTCACCAATTTCAACGGTGCTGATTGTTTCTCTCCATCATCATCTTCTTCCACTAATTTTAATCCTTCTCTTAACAACATGGTTTTGTTTCGTGATTATCTTAACAACACTTGTTCTTACTCGAACCCATTTTTGGTTCCTTCTAATTTTGTTCAAAACAAAATCGACAACGTTACTATTTCTTCATCTTCAGCTTCTAACTTTGAGAAAGTTAGTGAAGAAGATATTATTATTGATGATGAAGAATCGGAAATTTTTCCGAGAGAATCATCAGGGTTGTTGGAAGAGATAGTTTATAAGTTCATGAAAAATTCAAAAACAACAAAATCAGTTTCCAAGTTtaataataataataataaCGAAAAGAAGGTGAAAACAGAAATATCTCATTCTCATGACAACATGTTTCCTGTGATGGAGGGTTTTGGTTCTGTGTCTTATGATCATCATGAACAAGGTGGCATGCAGCTTAAACTGACAATGTGA 846 0.4255 MEQALRRLNGMSPTEHPNDHLTSYSAVPTNKTSGSPAGTIRYRGVRRRPWGRYAAEIRDPHSKERRWLGTFDTAEEAACAYDCAARAMRGTKARTNFLYHPEPTENQNRFHPFNIPQHLHVTNFNGADCFSPSSSSSTNFNPSLNNMVLFRDYLNNTCSYSNPFLVPSNFVQNKIDNVTISSSSASNFEKVSEEDIIIDDEESEIFPRESSGLLEEIVYKFMKNSKTTKSVSKFNNNNNNEKKVKTEISHSHDNMFPVMEGFGSVSYDHHEQGGMQLKLTM 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01852 281 SUPERFAMILY DNA-binding domain 41 98 IPR016177 GO:0003677
Car07g01852 281 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 188 - -
Car07g01852 281 CDD AP2 41 97 IPR001471 GO:0003700|GO:0006355
Car07g01852 281 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Car07g01852 281 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 22 188 - -
Car07g01852 281 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Car07g01852 281 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Car07g01852 281 MobiDBLite consensus disorder prediction 15 37 - -
Car07g01852 281 MobiDBLite consensus disorder prediction 1 39 - -
Car07g01852 281 Pfam AP2 domain 41 90 IPR001471 GO:0003700|GO:0006355
Car07g01852 281 Gene3D AP2/ERF domain 40 99 IPR036955 GO:0003700|GO:0006355
Car07g01852 281 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01852 Car-Chr7 20614209 20616683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01852 1 273 AP2-EREBP Transcription Factor Family AT1G24590 36.792 2.13e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car07g01852 AP2 6.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01852 - - cam:101499315 505.368