Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01825 ATGTCTCCTTCAACTTCATTCATTCTCATCTTCCTCTTCCTCTTCTATTTCACACCATCACCAACACTTTCCGATCCAAGAGCAACAAAAGCATCTTTACTCTGCACAAACAGAACCGCGACCTCAATGCCTCACCGCAAAATTTTCATATCGAATTTCCTCTCAGCAATGGACTCACTAACACCTCTAATCTCAACTCAAAGATACGGCGCCGTTTCAAAAGGAACTACTCAAAACGCCGCCGTTTACGCTTTCGCCGAGTGTTTCAAAGACCTCTCTCAATCAGATTGTAACGTATGCATCGCACAATGTAAAACTCAGATCCTAAGCTGTTTACCTTTTCAAAAAGGGACACGTGGCGGTAAATTATTTTTTGACGGTTGTTACCTACGCTACGATGACTACAATTTCTTCAACGAGAGTTTTAGTGATCAAGACACGGTTCTGTGTAGTGGAAATACCACTAGTAATGGTGATATTGTTGATGTTTATCGAGATAGTGCACTGAAATTGGTGAGAAATTTGAGTGTTTTGGCGCCAAAAAATGATGGGTTTTCGGTTGGGTTTGTTAAGAGAGAGAATGTAACGGTTTATGGTTTGGCTCAGTGTTGGAGGTTTATTAATGGAAGTAAGTGTGGTGAATGTTTGGAAGATGCGGTTAGTAGGATTGGTTCTTTGTGTGGGAAGAAAGAGGAAGCGAGGGGTTTGAATTCTGGTTGTTATTTGAGGTATTCGGGGAAAAAGTTTTATAATAATAATTCAAATGGTAGTGATGTAATTGATGGAAATCATGGACACCGGAAAATGGATATAATTCTGGCTTCATCTTTTGCTGTTGTGGCACTTCTTTTGGCTGTTGCAACAGTGGTTTTCTTCACAAGGAAGAATGTAATGAGGAGAAGAAGAGAGAGAAGACAGTTTGGTACACTTTTGGACAAAGTGAACAAATCCAAGCTAAATGTTCCATACGAAATTCTTGAAAAGGCAACAGATTACTTCGATGATGCCAATAAACTTGGGCAAGGAGGATCAGGTTCAGTTTATAAAGGAGTTATGCCAGATGGAAATATTGTGGCCGTAAAAAGGCTTAGCTTTAACTCAACACAATGGGTAGATCATTTCTTCAATGAGGTCAATTTGATCAGTGGAATTCATCACAAAAATCTCGTCAAGCTTTTGGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCCAACCAAAGTCTCCATGATCACCTATCTGTTAGAAGGATTTGTCAACCTCTTACTTGGGAACTAAGGCACAAGGTCATATTGGGAATTGCAGAAGGCATGGCTTACCTTCATGAGGAATCACATGTGAGAATCATTCATAGAGATATAAAATTAAGCAACATTCTTCTTGAGGAGGACTTCACACCCAAGATTGCTGATTTTGGACTTGCTAGATTGTTTCCAGAAAACAATTCTCACATTAGCACAGTCGTTGCCGGGACACTAGGTTATATGGCTCCTGAGTACGTAATTCGCGGGAAGTTAACCGAGAAAGCAGATGTTTATAGTTTTGGAGTTCTAGTTATTGAAATTGTATCTGGCAAAAGAAACAGTTCCTATGTTCTAAATTCATCCTCTATCCTACAAACGGTTTGGAACCTTTATGGATCAAATAGGCTATCTGACATTTTTGATCCAATCCTAGAGGGTAATTTCCCTACCGAGGAAGCTTGTCAAATGCTTCAGATAGGGTTGCTTTGTGCACAAGCAACTGCAGAACTGAGACCATCAATGTCGGTAGTTGTAAAAATGATCAATAACAACCACGAAATTTCTCAGCTAACACAGCCACCTTTTATTAATTCGAGTAGTTCAGAACTCAGCAAATCCACTTTGCCGAGATATGATTTTCGTCTGCAATCCAACACTCAGTCTTCAGGGGATACTATGACTGAAAGTTTGGTTGAGCCTAGGTGA 1965 0.4 MSPSTSFILIFLFLFYFTPSPTLSDPRATKASLLCTNRTATSMPHRKIFISNFLSAMDSLTPLISTQRYGAVSKGTTQNAAVYAFAECFKDLSQSDCNVCIAQCKTQILSCLPFQKGTRGGKLFFDGCYLRYDDYNFFNESFSDQDTVLCSGNTTSNGDIVDVYRDSALKLVRNLSVLAPKNDGFSVGFVKRENVTVYGLAQCWRFINGSKCGECLEDAVSRIGSLCGKKEEARGLNSGCYLRYSGKKFYNNNSNGSDVIDGNHGHRKMDIILASSFAVVALLLAVATVVFFTRKNVMRRRRERRQFGTLLDKVNKSKLNVPYEILEKATDYFDDANKLGQGGSGSVYKGVMPDGNIVAVKRLSFNSTQWVDHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEYVPNQSLHDHLSVRRICQPLTWELRHKVILGIAEGMAYLHEESHVRIIHRDIKLSNILLEEDFTPKIADFGLARLFPENNSHISTVVAGTLGYMAPEYVIRGKLTEKADVYSFGVLVIEIVSGKRNSSYVLNSSSILQTVWNLYGSNRLSDIFDPILEGNFPTEEACQMLQIGLLCAQATAELRPSMSVVVKMINNNHEISQLTQPPFINSSSSELSKSTLPRYDFRLQSNTQSSGDTMTESLVEPR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01825 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Car07g01825 654 Gene3D Phosphorylase Kinase; domain 1 293 408 - -
Car07g01825 654 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 642 - -
Car07g01825 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 19 642 - -
Car07g01825 654 ProSiteProfiles Gnk2-homologous domain profile. 145 249 IPR002902 -
Car07g01825 654 SUPERFAMILY Protein kinase-like (PK-like) 319 635 IPR011009 -
Car07g01825 654 Pfam Salt stress response/antifungal 35 135 IPR002902 -
Car07g01825 654 Pfam Salt stress response/antifungal 156 245 IPR002902 -
Car07g01825 654 Gene3D - 145 249 IPR038408 -
Car07g01825 654 Gene3D - 29 137 IPR038408 -
Car07g01825 654 Gene3D Transferase(Phosphotransferase) domain 1 409 616 - -
Car07g01825 654 SMART serkin_6 333 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01825 654 MobiDBLite consensus disorder prediction 634 648 - -
Car07g01825 654 CDD STKc_IRAK 339 603 - -
Car07g01825 654 Pfam Protein kinase domain 335 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01825 654 ProSiteProfiles Protein kinase domain profile. 333 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01825 654 MobiDBLite consensus disorder prediction 634 654 - -
Car07g01825 654 ProSiteProfiles Gnk2-homologous domain profile. 29 137 IPR002902 -
Car07g01825 654 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01825 Car-Chr7 19410188 19414434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01825 20 498 Receptor kinase-like Gene Family AT1G70530 59.916 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g01825 Pkinase 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01825 - - gmx:100305402 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01825 07 19410188 19414434 Car07g01825 07 19410188 19414434 ECH
Car07g01825 07 19410188 19414434 Car08g01059 08 10279858 10284981 PCT