Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01811 ATGCAGGACGAGGCACAAATCTTGATTGATTTGAACACTCAACTTCATTCAGAGACTGTTGTTTCTGTTCAAAATGAGGATCCTGGTGTTTCTTCATCTCTTGTTAATGCTGTCATCATGTCTCAGCAGCCAGTTCTGAAAAAACCAACAAGGCAGTGGGCTGCTTGGACTCGCCAAGAGGAAGAAAGCTTCTTCACCGCATTGCGGCAAGTTGGGAAGAATTTTGAGAAAATCACTTCCCGTGTACAAAGTAAAAACAAGGATCAGGTCAGGCATTATTACTATCGTCTCGTGAGACGGATGAACAAACTTCTTGGTCCAGGATTATGTCTGGATGCCAAAAATTCAAAAGATACTAATGCTGCAATGCTTCGTTGGTGGTCTTTATTGGAAAAGTATAGCTGCAAAGCCTCAAAGCTTCACCTAAAGCCCCGAAGGTTTAAAATATTTCTAGAAGCCTTGGAGCACCAACTTTTGAAGGACCGAAAGAAGAATGTAAGGAAGCGACCTTTGCAGGGTGGAAATTGTCAGCCTTCTGCTCTAAACGCTGTCTCAAATCAAGCTAGAGGATCAGGAAATGATACCCGTGCAGTTAAAATGATTCTTGTCGACAGTCAAAATATTATAAAACTTGGACCTTCAAAACCACCATTGAAGCGCAATGTGAACATGGGTGTTAACCGTAGTAATGCTAAGGGAGATTCAAATAACTCGAAACCTACAAGGCAGCGAAAGAAATCAGGTATAGCCACATCAGCTGCATATAGAAAATGGGAGAAGGCTGCAATTGCTGGCGTCTCTTTAGTTGCAGATGCTGCTGAGCATTTGGAGCGAGCTGCCACTGTTAAAGATGTTGAACATGGCCAGGAGAATCCAGGGGAAAAATGCTCTGAACCTGTCGATCAAGTTCTGTCCTCTTTACCGACATTTCCACCAAATCACTTTGTTGATAACAATGTGCAGAATATTATGAAACTTAAGCTCCAATTGTTCCCAATTGATGAACCCACTCGAAGAGCTTTGGAAATGGATAAGCATAATCCATACTTGGAGCTTACGCTCAGTACACGAAAGAAGATATCATCAATTTTAGAACATCTGAACCGTAAATGGGGCAATTCAAGCATAGCAATCGGAGAATTGGTGCTTTTTCCTTATGGTGTTCAAAAGGAAAACTTGAATAATTATCAAAGATGGAACCAGGAATCTACTCTTAGTGCGGCAGATATATATGCAGTGATAGGAAGTCCACCTATATTCCGTTTGAGGTATGGTTGGTTCTCTAATACTAAGCACGGGGCATTAAATATGCAAGCACCTGTAGCATCCAGCTGCTTGGCTAGACAATCTAAAAATGGTGGTGACAATATGAAGGATCAAATTGTGAATTTGGCATCACTTCCTATACCATCAACTAATAATTACTCCACGGAGTGTGCTGTAGATTGCGGAACATCCTTGATCAAAACTGGTGCTCTTACCACTACTTCAACTTATTTGTCTAATGCTAGAGATGACAGTACTTACCAGAATACAAGCACTGAGGAACCTTGTGGACCTACAGCTTTTATATCATTGCATGGAAAAGATGTTACAGATGGAGCTGTGACTAGAAAGTTGGAGGACATGGATGATTTAAAATCAAACAGTGGATCAGGCGTGTCAGCTGGTGAGTGGGCTGACAGCCTTACCAACATCAGTGTGGGGGATCTACTTTTAGGAGTGTCCCAAAATCTCGATGATAACTGCATCAATCCTCTTATTGGTGAGAATTGTCACAGTGTTCATCAAATTCCTTTTAGTAGTGATTCTTTTGATGCTGCTATAGCCGCTCACATATCTAAACACCAAGACAAGATTGGACAATCAACTATGGCATCTCATATGTCTTCCATCTGGGATGCTGAAGAAACACGTGATGCTTTCTCATTCAAAAAGGATCCTATTCTTCATGAAAATGGTCCTTGTTTATCTTTCATTGTTTCTTTAGATTCAGATAAAAAGGTTCCTGGAAGAAGCTTTGAGAATTTGGATAAGCTGTCACCTGAAAAAGAGAGCCTCGTGGATGATATTGCTCAAACTGACCCAATGGCTATGGACAGTTGTGAGTCCGATGCAGATATCCAGTATCAGTTAGCAAAGGATTTGACTGGGCTAGCAGATATGTATTGGCCTGATTCTTTGGGACCACTGGATTTGAATATACCATCTACCAAGTACGATGGCGGTGATCTAATTTTAAGTGATAGTCTTAGTGGGTTGAATCGCTTGATAGCCAGCAGCCTGGATGCATTCCAGAATTGCTCCTTTTTTGGAATTGACAAAAAGGAAACACCATCGACAGTTGAGGCTCAAGAAACTGCCACTTTTTCAGATTTTAAAATTGGAAGTGGTATTTGA 2400 0.4113 MQDEAQILIDLNTQLHSETVVSVQNEDPGVSSSLVNAVIMSQQPVLKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFLEALEHQLLKDRKKNVRKRPLQGGNCQPSALNAVSNQARGSGNDTRAVKMILVDSQNIIKLGPSKPPLKRNVNMGVNRSNAKGDSNNSKPTRQRKKSGIATSAAYRKWEKAAIAGVSLVADAAEHLERAATVKDVEHGQENPGEKCSEPVDQVLSSLPTFPPNHFVDNNVQNIMKLKLQLFPIDEPTRRALEMDKHNPYLELTLSTRKKISSILEHLNRKWGNSSIAIGELVLFPYGVQKENLNNYQRWNQESTLSAADIYAVIGSPPIFRLRYGWFSNTKHGALNMQAPVASSCLARQSKNGGDNMKDQIVNLASLPIPSTNNYSTECAVDCGTSLIKTGALTTTSTYLSNARDDSTYQNTSTEEPCGPTAFISLHGKDVTDGAVTRKLEDMDDLKSNSGSGVSAGEWADSLTNISVGDLLLGVSQNLDDNCINPLIGENCHSVHQIPFSSDSFDAAIAAHISKHQDKIGQSTMASHMSSIWDAEETRDAFSFKKDPILHENGPCLSFIVSLDSDKKVPGRSFENLDKLSPEKESLVDDIAQTDPMAMDSCESDADIQYQLAKDLTGLADMYWPDSLGPLDLNIPSTKYDGGDLILSDSLSGLNRLIASSLDAFQNCSFFGIDKKETPSTVEAQETATFSDFKIGSGI 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01811 799 ProSiteProfiles Myb-like domain profile. 48 98 IPR001005 -
Car07g01811 799 CDD SANT 55 98 IPR001005 -
Car07g01811 799 SMART sant 52 100 IPR001005 -
Car07g01811 799 Gene3D - 56 121 - -
Car07g01811 799 Pfam Myb-like DNA-binding domain 55 97 IPR001005 -
Car07g01811 799 SUPERFAMILY Homeodomain-like 48 102 IPR009057 -
Car07g01811 799 MobiDBLite consensus disorder prediction 175 192 - -
Car07g01811 799 MobiDBLite consensus disorder prediction 165 192 - -
Car07g01811 799 MobiDBLite consensus disorder prediction 212 250 - -
Car07g01811 799 PANTHER CRAMPED PROTEIN 42 764 - -
Car07g01811 799 ProSiteProfiles SANT domain profile. 56 102 IPR017884 -
Car07g01811 799 MobiDBLite consensus disorder prediction 223 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01811 Car-Chr7 19111506 19119145 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car07g01811 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01811 - - aprc:113857455 1236.48