Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01801 ATGGCTCGTTTAGTGTCTTCGGTTTCCACCATCTTTATCATGTTTCTACTTCTTGCCGTCATTGAGATGGGAGCAAATATGGTGGCAGAGGCAAGGAGTTGTGAATCAAAAAGTGTATCCTATAAAGGACTATGTGTGTTCGACCGCAATTGTGCTCTTGTTTGCAGAACTGAGAATTTCGTTGGAGGACATTGCAAAGGCTTCGCTTTTGGTAGTACTTGCATTTGCTACAAACCTTGTTAA 243 0.4198 MARLVSSVSTIFIMFLLLAVIEMGANMVAEARSCESKSVSYKGLCVFDRNCALVCRTENFVGGHCKGFAFGSTCICYKPC 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01801 80 SMART gth_4 33 80 IPR003614 GO:0006952
Car07g01801 80 CDD Knot1 43 77 IPR003614 GO:0006952
Car07g01801 80 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Car07g01801 80 PRINTS Purothionin signature 49 62 IPR008176 GO:0006952
Car07g01801 80 Pfam Gamma-thionin family 32 80 - -
Car07g01801 80 SUPERFAMILY Scorpion toxin-like 31 80 IPR036574 -
Car07g01801 80 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Car07g01801 80 PANTHER DEFENSIN-LIKE PROTEIN P322 1 80 - -
Car07g01801 80 PANTHER DEFENSIN-LIKE PROTEIN 1 1 80 - -
Car07g01801 80 Gene3D - 27 80 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01801 Car-Chr7 18999940 19000354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01801 8 80 Plant Defensins Gene Families AT2G02100 45.205 5.06e-16 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01801 - - cam:105852502 127.102