Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01800 ATGGCTCGTTTAGTGTCTTCGGTTTCCACCATCTTTGTCATGTTTCTACTTCTTGTCGTTATTGAGATGGGAGCAAATATGGTGGCAGAGGCAAGGAGTTGTGTATCAAAAAGTTTTCGCTATAAAGGACTATGTTTGTTGGACCGCAATTGTGCTCTTATTTGCAAAACTGAGGGTTTCACTGAAGGACATTGCAGAGGCTTCGCTTTCGGTAGTAAATGCTTTTGCTACAAACCTTGTTAA 243 0.4115 MARLVSSVSTIFVMFLLLVVIEMGANMVAEARSCVSKSFRYKGLCLLDRNCALICKTEGFTEGHCRGFAFGSKCFCYKPC 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01800 80 CDD Knot1 43 77 IPR003614 GO:0006952
Car07g01800 80 PANTHER DEFENSIN-LIKE PROTEIN 1 7 80 - -
Car07g01800 80 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Car07g01800 80 SMART gth_4 33 80 IPR003614 GO:0006952
Car07g01800 80 Gene3D - 27 80 IPR036574 -
Car07g01800 80 SUPERFAMILY Scorpion toxin-like 31 80 IPR036574 -
Car07g01800 80 Pfam Gamma-thionin family 32 80 - -
Car07g01800 80 PANTHER LOW-MOLECULAR-WEIGHT CYSTEINE-RICH PROTEIN LCR70 7 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01800 Car-Chr7 18984212 18984814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01800 8 80 Plant Defensins Gene Families AT2G02100 43.836 4.24e-17 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01800 - - cam:105852502 109.768