Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01799 ATGGCTCGTTCAGTCCCTTTGGTTTCCACCATCATTGTCATATTTCTGCTTCTTGTGGCTACTGAGATGAGGCCAATTATGGTGGCAGAGGCAAGGACATGTGAATCACTAAGTTACTCCTTCAAAGGACTATGTGTGCGTGACCACAATTGTGCTGTTGTGTGCCAAACTGAGGGTTTCACTGGAGGACAATGCAAAGGCTTCCGTCGTAGATGTTTTTGTAATAAACCTTGTTAA 237 0.443 MARSVPLVSTIIVIFLLLVATEMRPIMVAEARTCESLSYSFKGLCVRDHNCAVVCQTEGFTGGQCKGFRRRCFCNKPC 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01799 78 SMART gth_4 33 78 IPR003614 GO:0006952
Car07g01799 78 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Car07g01799 78 CDD Knot1 43 74 IPR003614 GO:0006952
Car07g01799 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Car07g01799 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Car07g01799 78 Pfam Gamma-thionin family 32 78 - -
Car07g01799 78 Gene3D - 31 78 IPR036574 -
Car07g01799 78 PANTHER DEFENSIN-LIKE PROTEIN 1 1 78 - -
Car07g01799 78 PANTHER DEFENSIN-LIKE PROTEIN P322 1 78 - -
Car07g01799 78 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01799 Car-Chr7 18892812 18893502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01799 1 78 Plant Defensins Gene Families AT2G02100 56.410 1.03e-27 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01799 - - gsj:114420878 122.094