Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01798 ATGGCTCGTTCAATTCCTATGGTTTCCACCATCTTTGTCTTCCTTCTGCTTCTTGTAGCTACTGAGATGGTGGCAGAGGCAAGGACATGTGAGTCAAAAAGTCAAAAATTCAAAGGAGCATGTGTGAGTGATCGCAATTGTGCTTCTGTGTGCCAAACGGAACGTTTCCCTGGAGGGCACTGCCGTGGATTCCGTCGTAGATGTTTCTGTACTACACATTGTTAA 225 0.4578 MARSIPMVSTIFVFLLLLVATEMVAEARTCESKSQKFKGACVSDRNCASVCQTERFPGGHCRGFRRRCFCTTHC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01798 74 PANTHER DEFENSIN-LIKE PROTEIN P322 1 74 - -
Car07g01798 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Car07g01798 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Car07g01798 74 Pfam Gamma-thionin family 28 74 - -
Car07g01798 74 CDD Knot1 39 71 IPR003614 GO:0006952
Car07g01798 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Car07g01798 74 Gene3D - 28 74 IPR036574 -
Car07g01798 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Car07g01798 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Car07g01798 74 SMART gth_4 29 74 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01798 Car-Chr7 18844680 18845739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01798 1 74 Plant Defensins Gene Families AT2G02100 55.844 1.88e-26 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01798 - - cam:101490338 117.857